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PLM3-1_170_b2_sep16_scaffold_2892

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2892_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..443
DNA (441bp) protein (147aa)
(P)ppGpp synthetase I, SpoT/RelA bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GTP pyrophosphokinase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2892_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(462..653)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RL28_SYMTH
50S ribosomal protein L28
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2892_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(659..1129)
DNA (471bp) protein (157aa)
Bifunctional protein HldE bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rfaE bifunctional protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2892_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1246..2685
DNA (1440bp) protein (480aa)
UbiD-like subunit of potential (De) carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of potential (de) carboxylase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2892_5
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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3290..3583
DNA (294bp) protein (98aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3-1_170_b2_sep16_scaffold_2892_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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3767..4057
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2892_7
unknown

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4139..4402
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2892_8
unknown

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4469..4705
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2892_9
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

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comp(4766..5656)
DNA (891bp) protein (297aa)
Methyltransferase, FkbM family Tax=uncultured Chloroflexi bacterium RepID=H5SBC9_9CHLR
Methyltransferase, FkbM family {ECO:0000313|EMBL:BAL53465.1}; species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
methyltransferase
PLM3-1_170_b2_sep16_scaffold_2892_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5920..6711)
DNA (792bp) protein (264aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2892_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6858..8600
DNA (1743bp) protein (581aa)
DNA mismatch repair protein MutL bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mutL; DNA mismatch repair protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_2892_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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8851..9768
DNA (918bp) protein (306aa)
tRNA dimethylallyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tRNA delta(2)-isopentenylpyrophosphate transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 12 items

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