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PLM3-1_170_b2_sep16_scaffold_435

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_435_1
Loxodonta africana, Loxodonta, Proboscidea, Mammalia, Chordata, Metazoa

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349..1431
DNA (1083bp) protein (361aa)
PREDICTED: NHL repeat-containing protein 3-like Tax=Loxodonta africana RepID=UPI0002234850
Uncharacterized protein {ECO:0000313|Ensembl:ENSLAFP00000000653}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.;" source="Loxodonta africana (African elephant).;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_435_2
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1515..2888
DNA (1374bp) protein (458aa)
hypothetical protein Tax=Flavobacterium sp. WG21 RepID=UPI000345CFE7
Uncharacterized protein {ECO:0000313|EMBL:KFF18366.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
PLM3-1_170_b2_sep16_scaffold_435_3
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3077..4174)
DNA (1098bp) protein (366aa)
Uncharacterized protein Tax=Treponema maltophilum ATCC 51939 RepID=S3L4E9_TREMA
hypothetical protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM3-1_170_b2_sep16_scaffold_435_4
Petromyzon marinus, Petromyzon, Petromyzontiformes, Chordata, Metazoa

Not on your lists

comp(4249..6168)
DNA (1920bp) protein (640aa)
hypothetical protein Tax=Pseudomonas pyrrocinia RepID=UPI0002E5F647
Uncharacterized protein {ECO:0000313|Ensembl:ENSPMAP00000009654}; Flags: Fragment;; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.;" source="Petromyzon marinus (Sea lamprey).;"
lipoxygenase
PLM3-1_170_b2_sep16_scaffold_435_5
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6191..6637)
DNA (447bp) protein (149aa)
hypothetical protein Tax=Wenxinia marina RepID=UPI00037CC0DD
Wenxma_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70289.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_435_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

7320..9020
DNA (1701bp) protein (567aa)
gluconate 2-dehydrogenase (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DJA0_THETG
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b2_sep16_scaffold_435_7
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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9099..9761
DNA (663bp) protein (221aa)
NAD-dependent epimerase/dehydratase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSF1_ACCPU
Cholesterol dehydrogenase {ECO:0000313|EMBL:KFB69449.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
NAD-dependent epimerase/dehydratase
PLM3-1_170_b2_sep16_scaffold_435_8
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9786..10115
DNA (330bp) protein (110aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003610586
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
PLM3-1_170_b2_sep16_scaffold_435_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10069..10689
DNA (621bp) protein (207aa)
hypothetical protein Tax=Bacillus sp. L1(2012) RepID=UPI00034902B6
pyrrolidone-carboxylate peptidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_435_10
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

comp(10666..11112)
DNA (447bp) protein (149aa)
Tax=GWA2_OP3_52_8_curated
PLM3-1_170_b2_sep16_scaffold_435_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11135..12292)
DNA (1158bp) protein (386aa)
DNA methylase N-4/N-6 domain-containing protein Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZU5_XANCT
DNA methylase N-4/N-6 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3-1_170_b2_sep16_scaffold_435_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12424..13893)
DNA (1470bp) protein (490aa)
UbiD-like subunit of potential (De) carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of potential (de) carboxylase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_435_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14005..15063)
DNA (1059bp) protein (353aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_435_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15221..16294
DNA (1074bp) protein (358aa)
Amidohydrolase 2 Tax=Frankia sp. (strain EuI1c) RepID=E3J7T4_FRASU
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_435_15
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

16725..16937
DNA (213bp) protein (71aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
PLM3-1_170_b2_sep16_scaffold_435_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16934..17305
DNA (372bp) protein (124aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_435_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17389..18387)
DNA (999bp) protein (333aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_435_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18883..19758
DNA (876bp) protein (292aa)
Carboxymethylenebutenolidase bin=GWC2_Bacteroidetes_40_22 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
carboxymethylenebutenolidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_435_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19929..20909
DNA (981bp) protein (327aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_435_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21046..22023
DNA (978bp) protein (326aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_435_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22337..24514)
DNA (2178bp) protein (726aa)
malate synthase G (EC:2.3.3.9)
Malate synthase G bin=GWD2_Deltaproteobacteria_55_8 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_435_22
unknown

Not on your lists

24985..25182
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_435_23
unknown

Not on your lists

25417..25965
DNA (549bp) protein (183aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_435_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26019..26252
DNA (234bp) protein (78aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_435_25
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26262..26966
DNA (705bp) protein (235aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_435_26
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27109..27477)
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 26 items

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