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PLM3-1_170_b2_sep16_scaffold_862

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_862_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2549)
DNA (2547bp) protein (849aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_862_2
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2612..2881)
DNA (270bp) protein (90aa)
NUDIX hydrolase bin=GWF2_Bacteroidetes_41_9 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Tax=RBG_13_Bacteroidetes_42_15_curated
PLM3-1_170_b2_sep16_scaffold_862_3
unknown

Not on your lists

comp(3083..3322)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_862_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3524..4162)
DNA (639bp) protein (213aa)
Urea carboxylase-associated protein 1 bin=GWD2_Deltaproteobacteria_55_8 species=Pantoea sp. Sc1 genus=Pantoea taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_862_5
unknown

Not on your lists

4190..4339
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_862_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4672..4914)
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_862_7
unknown

Not on your lists

5386..5985
DNA (600bp) protein (200aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_862_8
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6046..7566)
DNA (1521bp) protein (507aa)
fumarase (EC:4.2.1.2)
Fumarate hydratase class I, anaerobic Tax=Porphyromonas gingivalis RepID=Q7MUS2_PORGI
Tax=GWD2_Bacteroidetes_33_33_curated
PLM3-1_170_b2_sep16_scaffold_862_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7665..8657
DNA (993bp) protein (331aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_862_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8786..9265
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Octadecabacter arcticus 238 RepID=M9RRN7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETX08829.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_862_11
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

9371..9604
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Microcystis aeruginosa RepID=I4F8L1_MICAE
hypothetical protein
Tax=CG_Anaero_04
PLM3-1_170_b2_sep16_scaffold_862_12
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9601..9963
DNA (363bp) protein (121aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMS7_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU58848.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3-1_170_b2_sep16_scaffold_862_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10005..10283
DNA (279bp) protein (93aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_862_14
RLO_PLX_64_10, Bacteria

Not on your lists

10319..10624
DNA (306bp) protein (102aa)
Putative uncharacterized protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VL57_9CYAN
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_862_15

Not on your lists

10843..11274
DNA (432bp) protein (144aa)
hypothetical protein Tax=Burkholderia kururiensis RepID=UPI00034877CF
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48925.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_862_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

11542..12297
DNA (756bp) protein (252aa)
NmrA family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUF9_9CHLR
NmrA family protein {ECO:0000313|EMBL:EFH84027.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
nucleoside-diphosphate-sugar epimerase
PLM3-1_170_b2_sep16_scaffold_862_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12437..12733
DNA (297bp) protein (99aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b2_sep16_scaffold_862_18
unknown

Not on your lists

13024..13761
DNA (738bp) protein (246aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_862_19
R_RIF_OD1_06_38_12b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

13915..15132
DNA (1218bp) protein (406aa)
Uncharacterized protein Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6X3_FRAAD
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12b_curated
PLM3-1_170_b2_sep16_scaffold_862_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15270..17609
DNA (2340bp) protein (780aa)
Molybdopterin oxidoreductase bin=GWD2_Deltaproteobacteria_55_8 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_862_21
unknown

Not on your lists

17761..17913
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_862_22

Not on your lists

comp(18088..18387)
DNA (300bp) protein (100aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C42B7
Uncharacterized protein {ECO:0000313|EMBL:KKM17348.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b2_sep16_scaffold_862_23
unknown

Not on your lists

comp(18529..18645)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_862_24
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18823..19158)
DNA (336bp) protein (112aa)
Putative RNA-binding protein RbpA bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative RNA-binding protein RbpA
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_862_25
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19509..20267
DNA (759bp) protein (253aa)
Carboxymethylenebutenolidase bin=GWD2_Deltaproteobacteria_55_8 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carboxymethylenebutenolidase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_862_26
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

20298..20588
DNA (291bp) protein (97aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_862_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20841..22079
DNA (1239bp) protein (413aa)
Major facilitator superfamily MFS_1 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily MFS_1
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_862_28
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22171..22338)
DNA (168bp) protein (56aa)
Carboxylyase-related protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Vdcc protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 28 items

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