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PLM3-1_170_b2_sep16_scaffold_876

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_876_1

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143..337
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK70748.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b2_sep16_scaffold_876_2
unknown

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comp(817..1479)
DNA (663bp) protein (221aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_876_3
unknown

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comp(1593..1967)
DNA (375bp) protein (125aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_876_4
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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comp(2777..2944)
DNA (168bp) protein (56aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Anabaena variabilis genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
PLM3-1_170_b2_sep16_scaffold_876_5
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(2945..3145)
DNA (201bp) protein (67aa)
Uncharacterized protein family UPF0150 domain protein {ECO:0000313|EMBL:KJU82108.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
PLM3-1_170_b2_sep16_scaffold_876_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3507..4256
DNA (750bp) protein (250aa)
surE; 5'/3'-nucleotidase SurE (EC:3.1.3.5 3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
stationary-phase survival protein SurE
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b2_sep16_scaffold_876_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4281..4679
DNA (399bp) protein (133aa)
Heat shock protein 15 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX85_NITHN
RNA-binding S4 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3-1_170_b2_sep16_scaffold_876_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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4761..5828
DNA (1068bp) protein (356aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
uncharacterized protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_876_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5893..6237
DNA (345bp) protein (115aa)
UPF0145 protein Acid_4599 Tax=Solibacter usitatus (strain Ellin6076) RepID=Y4599_SOLUE
hypothetical protein
UPF0145 protein Acid_4599 {ECO:0000255|HAMAP-Rule:MF_00338}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b2_sep16_scaffold_876_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6556..7269)
DNA (714bp) protein (238aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative circadian clock protein, KaiC
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_876_11
unknown

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comp(7460..10540)
DNA (3081bp) protein (1027aa)
Putative uncharacterized protein (Fragment) Tax=Phytophthora sojae (strain P6497) RepID=G5AFW0_PHYSP
Putative uncharacterized protein {ECO:0000313|EMBL:EGZ05476.1}; Flags: Fragment;; species="Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.;" source="Phytophthora sojae (strain P6497) (Soybean stem and root rot agent); (Phytophthora megasperma f. sp. glycines).;"
PLM3-1_170_b2_sep16_scaffold_876_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10984..11355
DNA (372bp) protein (124aa)
Response regulator receiver domain protein (CheY-like) Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INK1_ANADE
response regulator receiver domain-containing protein
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABC80382.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM3-1_170_b2_sep16_scaffold_876_13
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11434..11949
DNA (516bp) protein (172aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
Probable chemoreceptor glutamine deamidase CheD Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCQ3_ANASK
MCP proteins methylation stimulator CheD
PLM3-1_170_b2_sep16_scaffold_876_14
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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11960..13699
DNA (1740bp) protein (580aa)
CheA signal transduction histidine kinase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INJ5_ANADE
signal transduction histidine kinase CheA
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3-1_170_b2_sep16_scaffold_876_15
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

13696..14232
DNA (537bp) protein (179aa)
CheW protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCQ1_ANASK
CheW protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3-1_170_b2_sep16_scaffold_876_16
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

14338..15735
DNA (1398bp) protein (466aa)
Methyl-accepting chemotaxis sensory transducer Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CIW1_MYXFH
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3-1_170_b2_sep16_scaffold_876_17
unknown

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15748..15912
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 17 items

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