ggKbase home page

PLM3-1_170_b2_sep16_scaffold_14973

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_14973_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28..657)
DNA (630bp) protein (210aa)
thiE; thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) (EC:2.5.1.3)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI000377AC3A
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_14973_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(663..2003)
DNA (1341bp) protein (447aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY46_DESAC
two component sigma54 specific Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_14973_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2008..3117)
DNA (1110bp) protein (370aa)
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6L7_GEODF
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_14973_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3298..3765
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_14973_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3767..4495
DNA (729bp) protein (243aa)
Transcription termination factor NusA bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NusA antitermination factor
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 5 items

View Taxonomy