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PLM3-1_170_b2_sep16_scaffold_5438

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_5438_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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352..2946
DNA (2595bp) protein (865aa)
leuS; leucine tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:CBE68415.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Leucine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF86_9BACT
PLM3-1_170_b2_sep16_scaffold_5438_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2943..3452
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF87_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68416.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_5438_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3464..4459
DNA (996bp) protein (332aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
Putative DNA polymerase III, delta subunit {ECO:0000313|EMBL:CBE68417.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBE68417.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative DNA polymerase III, delta subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF88_9BACT
PLM3-1_170_b2_sep16_scaffold_5438_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(4463..4735)
DNA (273bp) protein (91aa)
30S ribosomal protein S20 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF89_9BACT
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500, ECO:0000313|EMBL:CBE68418.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_5438_5
R_NC10_66_22, NC10, Bacteria

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4786..5862
DNA (1077bp) protein (359aa)
mviN; virulence factor MviN-like protein; K03980 virulence factor bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
Virulence factor protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_5438_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5813..6457
DNA (645bp) protein (215aa)
Virulence factor protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF91_9BACT
Virulence factor protein
Virulence factor protein {ECO:0000313|EMBL:CBE68420.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_5438_7
CSP1_5_NC10, NC10, Bacteria

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6838..8604
DNA (1767bp) protein (589aa)
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_5438_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8653..9657
DNA (1005bp) protein (335aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ketol-acid reductoisomerase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF94_9BACT
PLM3-1_170_b2_sep16_scaffold_5438_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9819..10691
DNA (873bp) protein (291aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862, ECO:0000313|EMBL:CBE68424.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Methylenetetrahydrofolate reductase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF95_9BACT
PLM3-1_170_b2_sep16_scaffold_5438_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10845..11777
DNA (933bp) protein (311aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
tRNA dimethylallyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF97_9BACT
PLM3-1_170_b2_sep16_scaffold_5438_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11759..12397
DNA (639bp) protein (213aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF98_9BACT
PLM3-1_170_b2_sep16_scaffold_5438_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12420..13010
DNA (591bp) protein (197aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003638E7C
PLM3-1_170_b2_sep16_scaffold_5438_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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13010..13744
DNA (735bp) protein (245aa)
cmk; cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Cytidylate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF99_9BACT
PLM3-1_170_b2_sep16_scaffold_5438_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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13790..14539
DNA (750bp) protein (250aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFA0_9BACT
1-acyl-sn-glycerol-3-phosphate acyltransferase
PLM3-1_170_b2_sep16_scaffold_5438_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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14567..15430
DNA (864bp) protein (288aa)
30S ribosomal protein S1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00035E1547
rpsA; 30S ribosomal protein S1
30S ribosomal subunit protein S1 {ECO:0000313|EMBL:CBE68430.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 15 items

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