ggKbase home page

PLM3_127_b1_sep16_scaffold_11954

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_11954_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..713
DNA (711bp) protein (237aa)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.1)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b1_sep16_scaffold_11954_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

667..966
DNA (300bp) protein (100aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b1_sep16_scaffold_11954_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1114..1719)
DNA (606bp) protein (202aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
clan AA aspartic protease TIGR02281 family
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_127_b1_sep16_scaffold_11954_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1924..2193
DNA (270bp) protein (90aa)
30S ribosomal protein S15 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsO; 30S ribosomal protein S15
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b1_sep16_scaffold_11954_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2263..4365
DNA (2103bp) protein (701aa)
Polyribonucleotide nucleotidyltransferase bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
pnp; polynucleotide phosphorylase/polyadenylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b1_sep16_scaffold_11954_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4397..4846
DNA (450bp) protein (150aa)
Zinc-dependent peptidase, M16 family bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
zinc-dependent peptidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 6 items

View Taxonomy