ggKbase home page

PLM3_127_b1_sep16_scaffold_6945

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_6945_1
unknown

Not on your lists

1..96
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_127_b1_sep16_scaffold_6945_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111..1865
DNA (1755bp) protein (585aa)
Lipid A export ATP-binding/permease protein MsbA bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phospholipid-lipopolysaccharide ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b1_sep16_scaffold_6945_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1878..3146
DNA (1269bp) protein (423aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b1_sep16_scaffold_6945_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3210..4289
DNA (1080bp) protein (360aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase bin=GWC2_Deltaproteobacteria_55_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b1_sep16_scaffold_6945_5
unknown

Not on your lists

4289..4408
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_127_b1_sep16_scaffold_6945_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4419..5360
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase bin=GWD2_Deltaproteobacteria_55_8 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_127_b1_sep16_scaffold_6945_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5436..5561
DNA (126bp) protein (42aa)
ABC transporter subfamily B Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HP48_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 7 items

View Taxonomy