ggKbase home page

PLM3_127_b1_sep16_scaffold_13597

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_13597_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2..361
DNA (360bp) protein (120aa)
isocitrate/isopropylmalate family dehydrogenase (EC:1.1.1.41)
Dehydrogenase, isocitrate/isopropylmalate family Tax=Clostridium botulinum BKT015925 RepID=F4A4M9_CLOBO
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b1_sep16_scaffold_13597_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648..1802)
DNA (1155bp) protein (385aa)
dipeptidase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
X-Pro dipeptidase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_127_b1_sep16_scaffold_13597_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2020..2841
DNA (822bp) protein (274aa)
RNA methylase bin=GWC2_Syntrophus__56_31 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
RNA methylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b1_sep16_scaffold_13597_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2951..3727
DNA (777bp) protein (259aa)
RNA methylase bin=CNBR_ACIDO species=Chelatococcus sp. GW1 genus=Chelatococcus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA methylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b1_sep16_scaffold_13597_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3799..4062
DNA (264bp) protein (88aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002EB79CA
RNA methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 5 items

View Taxonomy