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PLM3_127_b1_sep16_scaffold_8398

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_8398_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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251..1777
DNA (1527bp) protein (509aa)
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sigma 38, RpoS
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8398_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1863..2699)
DNA (837bp) protein (279aa)
Putative N5,N10-methylenetetrahydromethanopterin reductase-related protein bin=GWC2_Methylomirabilis_70_24 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8398_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2775..3278)
DNA (504bp) protein (168aa)
DinB family protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
DinB family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b1_sep16_scaffold_8398_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3302..3517)
DNA (216bp) protein (72aa)
Biotin/lipoyl attachment domain-containing protein bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
biotin/lipoyl attachment domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_8398_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3599..4750)
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase domain protein bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b1_sep16_scaffold_8398_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4759..5088)
DNA (330bp) protein (110aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
Enoyl-CoA hydratase bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 6 items

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