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PLM3-1_200_b1_sep16_scaffold_5493

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_5493_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..554)
DNA (552bp) protein (184aa)
DNA polymerase bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
polA; DNA polymerase I
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_5493_trna_1
unknown

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comp(660..733)
DNA (74bp)
transferRNA Met
PLM3-1_200_b1_sep16_scaffold_5493_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(957..1682)
DNA (726bp) protein (242aa)
Metallophosphoesterase bin=GWD2_Deltaproteobacteria_55_8 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
metallophosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_5493_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1821..2042
DNA (222bp) protein (74aa)
id=1883684 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_5493_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2208..3230)
DNA (1023bp) protein (341aa)
Homoserine kinase bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
homoserine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_5493_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3398..3628)
DNA (231bp) protein (77aa)
Putative uncharacterized protein bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_5493_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3956..4177
DNA (222bp) protein (74aa)
Cold-shock DNA-binding domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_5493_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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4355..4846
DNA (492bp) protein (164aa)
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_5493_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4961..7150
DNA (2190bp) protein (730aa)
Nitrite and sulphite reductase 4Fe-4S region bin=GWD2_Deltaproteobacteria_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrite and sulfite reductase 4Fe-4S region
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_5493_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7162..7764
DNA (603bp) protein (201aa)
id=1883725 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_5493_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7785..9710
DNA (1926bp) protein (642aa)
sat; Sulfate adenylyltransferase (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase) (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00066}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00066, ECO:0000313|EMBL:CBE68096.1};; ATP-sulfurylase {ECO:0000256|HAMAP-Rule:MF_00066}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00066}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Sulfate adenylyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMZ6_9BACT
PLM3-1_200_b1_sep16_scaffold_5493_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9798..10031
DNA (234bp) protein (78aa)
id=2073397 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_5493_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10092..10232)
DNA (141bp) protein (47aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 13 items

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