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PLM3-1_200_b1_sep16_scaffold_6767

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_6767_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(37..711)
DNA (675bp) protein (225aa)
50S ribosomal protein L25 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_6767_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(739..1692)
DNA (954bp) protein (318aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_6767_trna_2
unknown

Not on your lists

comp(1920..1990)
DNA (71bp)
transferRNA Gln
PLM3-1_200_b1_sep16_scaffold_6767_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2234..3088)
DNA (855bp) protein (285aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_6767_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3210..3821
DNA (612bp) protein (204aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PM24_9FIRM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_6767_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4441
DNA (618bp) protein (206aa)
Uncharacterized protein bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM3-1_200_b1_sep16_scaffold_6767_6
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

4455..4727
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VQ25_9EURY
hypothetical protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3-1_200_b1_sep16_scaffold_6767_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

4714..6387
DNA (1674bp) protein (558aa)
polB; DNA polymerase elongation subunit bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
polB; DNA polymerase elongation subunit
Tax=CSP1_3_Armatimonadetes
PLM3-1_200_b1_sep16_scaffold_6767_8
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

6354..6854
DNA (501bp) protein (167aa)
DNA polymerase B region Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDD4_DESAR
DNA polymerase B region
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM3-1_200_b1_sep16_scaffold_6767_9
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6860..7204
DNA (345bp) protein (115aa)
Tax=RBG_16_Gammaproteobacteria_51_14_curated
PLM3-1_200_b1_sep16_scaffold_6767_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7197..7487
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_6767_11
unknown

Not on your lists

comp(7542..7751)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_6767_trna_1
unknown

Not on your lists

comp(7715..7788)
DNA (74bp)
transferRNA Val
PLM3-1_200_b1_sep16_scaffold_6767_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(7893..8198)
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Sphingobium ummariense RL-3 RepID=T0KHN7_9SPHN
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_200_b1_sep16_scaffold_6767_13
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(8316..8906)
DNA (591bp) protein (197aa)
Thiamine pyrophosphate protein domain protein TPP-binding protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAS1_SPHTD
thiamine pyrophosphate protein domain-containing protein TPP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_200_b1_sep16_scaffold_6767_14
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(8884..9768)
DNA (885bp) protein (295aa)
Benzoylformate decarboxylase Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6R837_ENTCL
benzoylformate decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Displaying 16 items

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