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PLM3-1_200_b1_sep16_scaffold_3156

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_3156_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..271)
DNA (270bp) protein (90aa)
PAS modulated sigma54 specific transcriptional regulator, Fis family bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_3156_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

473..2194
DNA (1722bp) protein (574aa)
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB bin=bin3_NC10 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
general secretory pathway protein E
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_3156_3
unknown

Not on your lists

comp(2232..2462)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_3156_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2818..3288
DNA (471bp) protein (157aa)
Type II secretion system protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
type II secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_3156_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3291..4904
DNA (1614bp) protein (538aa)
Pilus-associated protein pilM bin=GWD2_Deltaproteobacteria_55_8 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_3156_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4905..5597
DNA (693bp) protein (231aa)
id=1993773 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_3156_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5594..6085
DNA (492bp) protein (164aa)
id=1993774 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_3156_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6082..7698
DNA (1617bp) protein (539aa)
Pilus (MSHA type) biogenesis protein MshL bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilus (MSHA type) biogenesis protein MshL
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_3156_9
unknown

Not on your lists

comp(8185..8349)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_3156_10
unknown

Not on your lists

comp(8448..8789)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_3156_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8921..10039
DNA (1119bp) protein (373aa)
TPR repeat protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_3156_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10089..10385
DNA (297bp) protein (99aa)
Glutaredoxin, GrxC bin=GWD2_Deltaproteobacteria_55_8 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutaredoxin 3
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_3156_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10388..10987)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PPR8_9ZZZZ
DedA family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 13 items

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