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PLM3-1_200_b1_sep16_scaffold_2958

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_2958_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..713)
DNA (711bp) protein (237aa)
Arginine--tRNA ligase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
argS; arginyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_2958_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(869..1966)
DNA (1098bp) protein (366aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_2958_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2110..2400)
DNA (291bp) protein (97aa)
Probable RNA 2'-phosphotransferase Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=KPTA_PYRAB
RNA:NAD 2'-phosphotransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_2958_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2397..3278)
DNA (882bp) protein (294aa)
Tartronate semialdehyde reductase bin=GWD2_Deltaproteobacteria_55_8 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
6-phosphogluconate dehydrogenase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_2958_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3362..3721)
DNA (360bp) protein (120aa)
Anti-ECFsigma factor, ChrR bin=GWD2_Deltaproteobacteria_55_8 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Anti-Sigm factor, ChrR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_2958_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3910..4203)
DNA (294bp) protein (98aa)
hypothetical protein bin=CNBR_ACIDO species=Methylomonas sp. MK1 genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_2958_7
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(4208..4429)
DNA (222bp) protein (74aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00035FEFE1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_200_b1_sep16_scaffold_2958_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4795..5109)
DNA (315bp) protein (105aa)
Addiction module antidote protein, HigA family, putative bin=GWC2_Deltaproteobacteria_66_88 species=gamma proteobacterium HTCC5015 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
XRE family plasmid maintenance system antidote protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_2958_9
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

comp(5320..5559)
DNA (240bp) protein (80aa)
Tax=RIFOXYC2_FULL_RIF01_39_67_curated
PLM3-1_200_b1_sep16_scaffold_2958_10
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5952..6167)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Microcystis aeruginosa RepID=I4F6E7_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI27669.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9808.;"
hypothetical protein
PLM3-1_200_b1_sep16_scaffold_2958_11
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6164..6586)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Microcystis aeruginosa RepID=I4F6E8_MICAE
Uncharacterized protein {ECO:0000313|EMBL:ELP54417.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa TAIHU98.;"
hypothetical protein
PLM3-1_200_b1_sep16_scaffold_2958_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6789..7967
DNA (1179bp) protein (393aa)
GTP cyclohydrolase II (EC:3.5.4.25 4.1.2.-)
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 12 items

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