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PLM3-1_200_b1_sep16_scaffold_1947

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_1947_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1228)
DNA (1227bp) protein (409aa)
adenine deaminase (EC:3.5.4.2)
Adenine deaminase bin=GWD2_Deltaproteobacteria_55_8 species=Cenarchaeum symbiosum genus=Cenarchaeum taxon_order=Cenarchaeales taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_1947_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1348..1932
DNA (585bp) protein (195aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Trypanosoma cruzi genus=Trypanosoma taxon_order=Kinetoplastida taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
chemotaxis sensory transducer
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_1947_3
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(1966..3414)
DNA (1449bp) protein (483aa)
Uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=GWA2_Nitrospirae_42_11_curated
PLM3-1_200_b1_sep16_scaffold_1947_4
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(3445..5232)
DNA (1788bp) protein (596aa)
HEAT-like repeat-containing protein Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9Y3_GEOBB
hypothetical protein
Tax=GWA2_Nitrospirae_42_11_curated
PLM3-1_200_b1_sep16_scaffold_1947_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5368..6138
DNA (771bp) protein (257aa)
ABC transporter related bin=GWD2_Deltaproteobacteria_55_8 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_1947_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6135..6926
DNA (792bp) protein (264aa)
Zn-dependent hydrolases of the beta-lactamase fold protein bin=GWD2_Deltaproteobacteria_55_8 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Zn-dependent hydrolases of the beta-lactamase fold
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_1947_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7033..7722)
DNA (690bp) protein (230aa)
NUDIX hydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NUDIX hydrolase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_1947_8
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(7719..8111)
DNA (393bp) protein (131aa)
hypothetical protein VspiD_00700 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
PLM3-1_200_b1_sep16_scaffold_1947_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8153..8620)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Amycolatopsis methanolica RepID=UPI00036C43EB
cupin region
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_200_b1_sep16_scaffold_1947_10
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

comp(8937..9950)
DNA (1014bp) protein (338aa)
quinolinate synthase (EC:4.1.99.- 2.5.1.72)
quinolinate synthetase (EC:4.1.99.-); K03517 quinolinate synthase [EC:2.5.1.72] bin=GW2011_AR10_complete species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_CP02_01
PLM3-1_200_b1_sep16_scaffold_1947_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10090..10650
DNA (561bp) protein (187aa)
id=2101453 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_1947_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10876..11199)
DNA (324bp) protein (108aa)
Glutaredoxin bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
grxD; glutaredoxin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_1947_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11214..11474)
DNA (261bp) protein (87aa)
BolA family protein bin=GWD2_Deltaproteobacteria_55_8 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
transcriptional regulator, BolA protein family
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_1947_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11506..11667)
DNA (162bp) protein (54aa)
Cold-shock DNA-binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alkyl hydroperoxide reductase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 14 items

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