ggKbase home page

PLM3-1_200_b1_sep16_scaffold_4464

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_4464_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..556)
DNA (555bp) protein (185aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_4464_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(786..1682)
DNA (897bp) protein (299aa)
Reactivating factor for ethanolamine ammonia lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_4464_3
unknown

Not on your lists

comp(1929..2891)
DNA (963bp) protein (321aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_4464_4
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3086..3493)
DNA (408bp) protein (136aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Ribonuclease VapC Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CU73_TRURR
PilT domain-containing protein
PLM3-1_200_b1_sep16_scaffold_4464_5
unknown

Not on your lists

comp(3490..3735)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_4464_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3768..4064)
DNA (297bp) protein (99aa)
DNA binding domain protein, excisionase family bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DNA binding domain-containing protein, excisionase family
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_4464_7
unknown

Not on your lists

4267..4701
DNA (435bp) protein (145aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_4464_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5073..5309
DNA (237bp) protein (79aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_4464_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5306..5704
DNA (399bp) protein (133aa)
Ribonuclease VapC Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUH7_9BACT
PilT protein domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_200_b1_sep16_scaffold_4464_10
unknown

Not on your lists

comp(5717..6097)
DNA (381bp) protein (127aa)

This feature has no annotations

Displaying 10 items

View Taxonomy