ggKbase home page

PLM3-1_200_b1_sep16_scaffold_11641

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_11641_1

Not on your lists

1..537
DNA (537bp) protein (179aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036CD598
Uncharacterized protein {ECO:0000313|EMBL:KKL79815.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_200_b1_sep16_scaffold_11641_2
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

692..1876
DNA (1185bp) protein (395aa)
arsenite-activated ATPase ArsA (EC:3.6.3.16); K01551 arsenite-transporting ATPase [EC:3.6.3.16] bin=bin1_lowGC species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
arsenite-activated ATPase ArsA
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_11641_3
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

1959..2870
DNA (912bp) protein (304aa)
4-hydroxybenzoate polyprenyltransferase Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDV9_ARCPA
4-hydroxybenzoate polyprenyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_11641_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

2872..3375
DNA (504bp) protein (168aa)
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC:4.1.1.-) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aromatic acid decarboxylase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Displaying 4 items

View Taxonomy