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PLM3-1_200_b1_sep16_scaffold_1865

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_1865_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(2..700)
DNA (699bp) protein (233aa)
ATP-grasp protein-like protein bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ATP-grasp protein-like protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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793..1884
DNA (1092bp) protein (364aa)
eno; enolase (EC:4.2.1.11) bin=bin1_lowGC species=Geobacillus sp. JF8 genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
eno; enolase (EC:4.2.1.11)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2178..3596
DNA (1419bp) protein (473aa)
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33 4.2.1.35) bin=bin1_lowGC species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin1_lowGC organism_group=Unknown_CP
3-isopropylmalate dehydratase large subunit
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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3608..4201
DNA (594bp) protein (198aa)
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33 4.2.1.35) bin=bin1_lowGC species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
3-isopropylmalate dehydratase small subunit
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_1865_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(4342..4566)
DNA (225bp) protein (75aa)
hypothetical protein bin=bin1_lowGC species=Thermodesulfobacterium thermophilum genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4751..6241
DNA (1491bp) protein (497aa)
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
sigma-54 factor RpoN
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6249..6791
DNA (543bp) protein (181aa)
sigma 54 modulation protein/ribosomal protein S30EA; K05808 putative sigma-54 modulation protein bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
sigma 54 modulation protein/ribosomal protein S30EA
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6794..7270
DNA (477bp) protein (159aa)
PTS system transporter subunit IIA bin=bin1_lowGC species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
PTS system transporter subunit IIA
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7257..8180
DNA (924bp) protein (308aa)
HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] bin=bin1_lowGC species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
aldolase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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8212..9063
DNA (852bp) protein (284aa)
glmZ(sRNA)-inactivating NTPase; K06958 UPF0042 nucleotide-binding protein bin=bin1_lowGC species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

9074..9484
DNA (411bp) protein (137aa)
PTS system permease (IIAMan), nitrogen regulatory IIA protein (fragment) bin=bin1_lowGC species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
PTS system fructose subfamily transporter subunit IIA
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1865_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

9602..9730
DNA (129bp) protein (43aa)
id=14425985 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
Displaying 12 items

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