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PLM3-1_200_b1_sep16_scaffold_4198

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_4198_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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2..1675
DNA (1674bp) protein (558aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
Putative uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_4198_2
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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1699..4230
DNA (2532bp) protein (844aa)
signal transduction histidine kinase, nitrogen specific, NtrB bin=bin1_lowGC species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
signal transduction histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_4198_3
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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4196..5230
DNA (1035bp) protein (345aa)
histidine kinase Tax=Desulfospira joergensenii RepID=UPI0003B3AE01
PAS domain S-box
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_4198_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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5549..5902
DNA (354bp) protein (118aa)
DNA-binding response regulator Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z6Z3_DEHE1
chemotaxis protein CheY
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_4198_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(6030..8609)
DNA (2580bp) protein (860aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
uvrA; excinuclease ABC subunit A
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_4198_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(8767..8958)
DNA (192bp) protein (64aa)
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily bin=bin1_lowGC species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_4198_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(8951..9331)
DNA (381bp) protein (127aa)
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily bin=bin1_lowGC species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_4198_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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9418..10101
DNA (684bp) protein (228aa)
glyA; serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] bin=bin1_lowGC species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_4198_9
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

10088..10627
DNA (540bp) protein (180aa)
glyA; serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] bin=bin1_lowGC species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
glyA2; serine hydroxymethyltransferase (EC:2.1.2.1)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_4198_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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10628..11173
DNA (546bp) protein (182aa)
transcriptional regulator NrdR bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
nrdR; transcriptional repressor NrdR
Tax=CSP1_2_Dadabacteria
Displaying 10 items

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