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PLM3_127_b2_sep16_scaffold_5138

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5138_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2..151
DNA (150bp) protein (50aa)
Binding--dependent transport system inner membrane component family protein Tax=Candidatus Endolissoclinum faulkneri L2 RepID=K7YPL1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETW95179.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
peptide/nickel transport system, permease protein
PLM3_127_b2_sep16_scaffold_5138_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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154..1059
DNA (906bp) protein (302aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW95180.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glutathione transport system permease GsiD; K02034 peptide/nickel transport system permease protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
glutathione transport system permease GsiD
PLM3_127_b2_sep16_scaffold_5138_3
unknown

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comp(1102..1470)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5138_4
unknown

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comp(1467..1745)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5138_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1767..2087)
DNA (321bp) protein (107aa)
id=14627830 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_5138_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2245..2505
DNA (261bp) protein (87aa)
hypothetical protein Tax=Methylophilus methylotrophus RepID=UPI000371F066
transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:ABD06619.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_127_b2_sep16_scaffold_5138_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2860..3075
DNA (216bp) protein (72aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_5138_8
unknown

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3079..3306
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5138_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3810..4166
DNA (357bp) protein (119aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_5138_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4622..5407
DNA (786bp) protein (262aa)
Putative fatty acid desaturase bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_APKG10H12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
aminotransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_5138_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5454..5792)
DNA (339bp) protein (113aa)
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_5138_12
unknown

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comp(6173..6436)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5138_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6476..7186)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RC53_9DELT
ybhL; conserved hypothetical protein; putative inner membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_5138_14
R_NC10_66_22, NC10, Bacteria

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comp(7411..7713)
DNA (303bp) protein (101aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_5138_15
unknown

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comp(8054..8251)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_5138_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(8254..8931)
DNA (678bp) protein (226aa)
id=3639818 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_5138_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8965..10026)
DNA (1062bp) protein (354aa)
Transcriptional regulator, GntR family bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Bacterial regulatory protein, gntR family
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_5138_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10251..10559
DNA (309bp) protein (103aa)
10 kDa chaperonin bin=GWC2_Methylomirabilis_70_16 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
groES; chaperonin, 10 kDa
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_5138_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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10614..10880
DNA (267bp) protein (89aa)
60 kDa chaperonin bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
chaperonin GroEL
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 19 items

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