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PLM3_127_b2_sep16_scaffold_3379

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3379_1
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..372
DNA (372bp) protein (124aa)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
PLM3_127_b2_sep16_scaffold_3379_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

487..1197
DNA (711bp) protein (237aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_127_b2_sep16_scaffold_3379_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1277..1642
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Burkholderia sp. BT03 RepID=J2ITW1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGJ63680.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
PLM3_127_b2_sep16_scaffold_3379_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2016..2969
DNA (954bp) protein (318aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=Caulobacter crescentus OR37 RepID=R0END4_CAUCE
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG88781.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_3379_5
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

3048..3506
DNA (459bp) protein (153aa)
putative acetyltransferase (EC:2.3.1.-)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00037B94E3
Tax=GWB2_Chloroflexi_54_36_curated
PLM3_127_b2_sep16_scaffold_3379_6
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3787..4659
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7B6D0_NOCDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH67395.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM3_127_b2_sep16_scaffold_3379_7
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

4680..5195
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Pseudomonas fluorescens Q2-87 RepID=J2Y7E6_PSEFL
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_127_b2_sep16_scaffold_3379_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5183..5797
DNA (615bp) protein (205aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_3379_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5871..7337
DNA (1467bp) protein (489aa)
Peptidase M20 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M20
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_3379_10
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7419..8570
DNA (1152bp) protein (384aa)
Major facilitator superfamily MFS_1 Tax=Geobacter sp. (strain M18) RepID=E8WQZ4_GEOS8
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADW15231.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM3_127_b2_sep16_scaffold_3379_11
unknown

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8575..9180
DNA (606bp) protein (202aa)
peptidoglycan-binding lysin domain-containing protein
PLM3_127_b2_sep16_scaffold_3379_12
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9259..10323
DNA (1065bp) protein (355aa)
N5,N10-methylenetetrahydromethanopterin reductase protein Tax=uncultured bacterium CSL144 RepID=G4WVR2_9BACT
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_3379_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10396..10998)
DNA (603bp) protein (201aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_3379_14
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11010..11948)
DNA (939bp) protein (313aa)
Fumarylacetoacetate (FAA) hydrolase family protein Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5D1_AGRVS
fumarylacetoacetate (FAA) hydrolase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_3379_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12098..13186
DNA (1089bp) protein (363aa)
Mandelate racemase Tax=Bradyrhizobium sp. S23321 RepID=I0GF91_9BRAD
Mandelate racemase {ECO:0000313|EMBL:ETX00107.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
mandelate racemase
PLM3_127_b2_sep16_scaffold_3379_16
unknown

Not on your lists

13284..13481
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3379_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13623..14765)
DNA (1143bp) protein (381aa)
L-alanine-DL-glutamate epimerase Tax=Ralstonia pickettii DTP0602 RepID=U3QI95_RALPI
L-alanine-DL-glutamate epimerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_3379_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14932..16674)
DNA (1743bp) protein (581aa)
Hydrolase CocE/NonD family protein Tax=Rhodococcus opacus M213 RepID=K8XBM6_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:ETW98810.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hydrolase CocE/NonD family protein
PLM3_127_b2_sep16_scaffold_3379_19
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16768..17763
DNA (996bp) protein (332aa)
Aminocarboxymuconate-semialdehyde decarboxylase Tax=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) RepID=Q15XL3_PSEA6
Uncharacterized protein {ECO:0000313|EMBL:ETX02083.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
aminocarboxymuconate-semialdehyde decarboxylase
PLM3_127_b2_sep16_scaffold_3379_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17867..18250)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6HF95_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETW92822.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_3379_21
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18247..18612)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKD7_9BACT
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
PLM3_127_b2_sep16_scaffold_3379_22
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18631..18894)
DNA (264bp) protein (88aa)
Prevent-host-death protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKD8_9BACT
prevent-host-death protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM3_127_b2_sep16_scaffold_3379_23
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19058..19363
DNA (306bp) protein (102aa)
MFS transporter Tax=Nocardiopsis halotolerans RepID=UPI00034D508B
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADH66950.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
Displaying 23 items

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