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PLM3_127_b2_sep16_scaffold_4622

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4622_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

657..1679
DNA (1023bp) protein (341aa)
Luciferase-like protein Tax=Hydrogenophaga sp. PBC RepID=I4MIF8_9BURK
luciferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_4622_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2076..2801
DNA (726bp) protein (242aa)
Glycosyl hydrolase, family 88 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4622_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(2829..3920)
DNA (1092bp) protein (364aa)
Methionine synthase vitamin-B12 independent Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8T5_SPHTD
methionine synthase vitamin-B12 independent
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_4622_4
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3967..4719)
DNA (753bp) protein (251aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CHA1_ALCDB
oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:AFT71122.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
PLM3_127_b2_sep16_scaffold_4622_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(4805..5125)
DNA (321bp) protein (107aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_4622_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5122..7515)
DNA (2394bp) protein (798aa)
acetolactate synthase catalytic subunit (EC:2.2.1.6)
Thiamine pyrophosphate enzyme-like TPP-binding protein bin=GWA2_Methylomirabilis_73_35 species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4622_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7827..8573
DNA (747bp) protein (249aa)
hypothetical protein bin=bin7_NC10_sister species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_4622_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8584..9147
DNA (564bp) protein (188aa)
GCN5-related N-acetyltransferase bin=GWC2_Methylomirabilis_70_16 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
N-acetyltransferase GCN5
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4622_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9078..9479)
DNA (402bp) protein (134aa)
mutT; mutator protein MutT (EC:3.6.1.-)
Mutator MutT protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4622_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(9595..10494)
DNA (900bp) protein (300aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4622_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10498..11364
DNA (867bp) protein (289aa)
glycine cleavage system t protein (EC:2.1.2.10); K06980 bin=bin7_NC10_sister species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gcvT1; glycine cleavage system T protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_4622_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11373..13400
DNA (2028bp) protein (676aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4622_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(13433..14662)
DNA (1230bp) protein (410aa)
radical SAM domain-containing protein bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Radical SAM domain protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_4622_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14781..16724
DNA (1944bp) protein (648aa)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4622_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16921..17124
DNA (204bp) protein (68aa)
thiamine biosynthesis protein ThiS bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas sp. S9 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine biosynthesis protein ThiS
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4622_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

17207..17986
DNA (780bp) protein (260aa)
Thiazole synthase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiazole synthase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4622_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17974..18606
DNA (633bp) protein (211aa)
thiE2; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4622_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18688..19845
DNA (1158bp) protein (386aa)
Amidohydrolase bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 18 items

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