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PLM3_127_b2_sep16_scaffold_8341

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8341_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..183
DNA (183bp) protein (61aa)
id=4555392 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_8341_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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204..560
DNA (357bp) protein (119aa)
PilT protein domain protein bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_8341_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(585..4430)
DNA (3846bp) protein (1282aa)
5-oxoprolinase (ATP-hydrolyzing) bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
N-methylhydantoinase A
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_8341_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4427..5758)
DNA (1332bp) protein (444aa)
Glutamate-1-semialdehyde 2,1-aminomutase bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aminotransferase class-III
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_8341_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6174..7412
DNA (1239bp) protein (413aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93783.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Sugar ABC superfamily ATP binding cassette transporter, substrate-binding bin=GWA2_Methylomirabilis_73_35 species=Mobiluncus mulieris genus=Mobiluncus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type sugar transport system, periplasmic component
PLM3_127_b2_sep16_scaffold_8341_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7559..8488
DNA (930bp) protein (310aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93785.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Binding-protein-dependent transport systems inner membrane component bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
PLM3_127_b2_sep16_scaffold_8341_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8481..9332
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93784.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ABC-type sugar transport system, permease component bin=GWA2_Methylomirabilis_73_35 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type sugar transport systems, permease component
PLM3_127_b2_sep16_scaffold_8341_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9466..10002
DNA (537bp) protein (179aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_8341_9
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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10029..10466
DNA (438bp) protein (146aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_127_b2_sep16_scaffold_8341_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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10604..11614
DNA (1011bp) protein (337aa)
Putative Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein bin=GWA2_Methylomirabilis_73_35 species=Sinorhizobium medicae genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aliphatic sulfonates ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_8341_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11657..12448
DNA (792bp) protein (264aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component bin=GWA2_Methylomirabilis_73_35 species=Saccharomonospora viridis genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_8341_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12450..13217
DNA (768bp) protein (256aa)
Binding-protein-dependent transport systems inner membrane component bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter, permease protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_8341_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13214..13984
DNA (771bp) protein (257aa)
Taurine transporter subunit ; membrane component of ABC superfamily bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative taurine ABC transporter permease protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_8341_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13987..14316
DNA (330bp) protein (110aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_8341_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14667..15071)
DNA (405bp) protein (135aa)
Nucleotidyltransferase domain Tax=Clostridiales RepID=D4MYK2_9FIRM
Nucleotidyltransferase domain.
Nucleotidyltransferase domain {ECO:0000313|EMBL:CDA32072.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
PLM3_127_b2_sep16_scaffold_8341_16
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(15462..15713)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Burkholderia phenoliruptrix BR3459a RepID=K0E2R6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJH69612.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
uncharacterized protein
PLM3_127_b2_sep16_scaffold_8341_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15714..16151)
DNA (438bp) protein (146aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. WH 5701 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uncharacterized protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_8341_18
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16279..16599)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKX4_9BACT
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM3_127_b2_sep16_scaffold_8341_19
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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16602..17681
DNA (1080bp) protein (360aa)
Putative Helix-turn-helix, type 11 domain protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Helix-turn-helix, type 11 domain protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_8341_20
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17675..18124)
DNA (450bp) protein (150aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_127_b2_sep16_scaffold_8341_21
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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comp(18108..18374)
DNA (267bp) protein (89aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
Displaying 21 items

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