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PLM3_127_b2_sep16_scaffold_9961

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9961_1
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..566)
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HMZ6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EJY55528.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_9961_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(576..1946)
DNA (1371bp) protein (457aa)
Magnesium chelatase subunit ChlI bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Mg-chelatase subunit ChlI-like protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_9961_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2102..2305
DNA (204bp) protein (68aa)
Oxidoreductase, molybdopterin-binding protein bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Anaerobic dehydrogenase, typically selenocysteine-containing
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_9961_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2302..4092
DNA (1791bp) protein (597aa)
Oxidoreductase, molybdopterin-binding protein bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase, molybdopterin-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_9961_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4135..4536
DNA (402bp) protein (134aa)
id=14627948 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_9961_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4561..4830
DNA (270bp) protein (90aa)
Transcriptional regulator, AsnC family bin=GWC2_Methylomirabilis_70_16 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator, AsnC family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_9961_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4832..4948
DNA (117bp) protein (39aa)
Nucleoside-diphosphate-sugar epimerase bin=GWC2_Methylomirabilis_70_16 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_9961_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4951..5940
DNA (990bp) protein (330aa)
Putative 2-hydroxyacid dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_9961_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5948..6280
DNA (333bp) protein (111aa)
DNA polymerase beta domain protein region bin=GWF2_Methylomirabilis_70_14 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase beta domain protein region
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_9961_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6258..6662
DNA (405bp) protein (135aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_9961_11
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7350..7607
DNA (258bp) protein (86aa)
Methyltransferase type 11 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNV3_SYNFM
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABK19105.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM3_127_b2_sep16_scaffold_9961_12
RLO_PLX_64_10, Bacteria

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7621..8379
DNA (759bp) protein (253aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036541E3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_9961_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8431..9147)
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein bin=bin7_NC10_sister species=Bordetella parapertussis genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_9961_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9221..10018
DNA (798bp) protein (266aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_9961_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9880..10881)
DNA (1002bp) protein (334aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_9961_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10914..11786)
DNA (873bp) protein (291aa)
livH-3; branched-chain amino acid ABC transporter permease bin=bin7_NC10_sister species=Natrinema versiforme genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_9961_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11786..14050)
DNA (2265bp) protein (755aa)
Putative uncharacterized protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_9961_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14106..14690)
DNA (585bp) protein (195aa)
livK; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
abc09s; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 5
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b2_sep16_scaffold_9961_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(14695..15378)
DNA (684bp) protein (228aa)
livK; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_9961_20
unknown

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15526..15690
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 20 items

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