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PLM3_127_b2_sep16_scaffold_513

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_513_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2..292
DNA (291bp) protein (97aa)
Sigma 54 modulation protein Tax=Sulfuricella denitrificans skB26 RepID=S6AB77_9PROT
sigma 54 modulation protein
Sigma 54 modulation protein {ECO:0000313|EMBL:BAN34403.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM3_127_b2_sep16_scaffold_513_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322..807
DNA (486bp) protein (162aa)
ptsN; protein-Npi-phosphohistidine-sugar phosphotransferase (EC:2.7.1.69)
Protein-Npi-phosphohistidine-sugar phosphotransferase Tax=Azoarcus sp. (strain BH72) RepID=A1K2R4_AZOSB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_513_3
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

776..1717
DNA (942bp) protein (314aa)
HPr kinase/phosphorylase (EC:2.7.1.-)
HPr kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; Short=HPrK/P {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.4.- {ECO:0000255|HAMAP-Rule:MF_01249};; HPr(Ser) kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
HPr kinase/phosphorylase Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=HPRK_NITEU
PLM3_127_b2_sep16_scaffold_513_4
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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2081..2920
DNA (840bp) protein (280aa)
UPF0042 nucleotide-binding protein SCD_n00553 Tax=Sulfuricella denitrificans skB26 RepID=S6A9N1_9PROT
hypothetical protein
Tax=CG_Beta_01
PLM3_127_b2_sep16_scaffold_513_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3006..3629
DNA (624bp) protein (208aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX Tax=Nitrosospira sp. APG3 RepID=M5DFA8_9PROT
aromatic acid decarboxylase
PLM3_127_b2_sep16_scaffold_513_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3946..4524
DNA (579bp) protein (193aa)
Peptidase S16, lon domain protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJH4_AZOSU
peptidase S16, lon domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_513_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4531..5574)
DNA (1044bp) protein (348aa)
A/G-specific adenine glycosylase Tax=Sulfuricella denitrificans skB26 RepID=S6AB71_9PROT
A/G-specific adenine glycosylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_513_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5589..7733)
DNA (2145bp) protein (715aa)
Putative uncharacterized protein Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y770_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAO35928.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
putative AsmA family protein
PLM3_127_b2_sep16_scaffold_513_trna_4
unknown

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comp(7863..7933)
DNA (71bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_513_9
unknown

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7871..8128
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_513_10
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

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8109..8747
DNA (639bp) protein (213aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000373676D
methyltransferase domain-containig protein
Tax=CG_Mariprof_04
PLM3_127_b2_sep16_scaffold_513_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8785..9207)
DNA (423bp) protein (141aa)
COG: Predicted nucleic acid-binding protein Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AL04_BURRH
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_513_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9207..9476)
DNA (270bp) protein (90aa)
Transcriptional regulator/antitoxin, MazE Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SSN5_9DELT
MazE protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_513_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9930..11753)
DNA (1824bp) protein (608aa)
Peptidase S8 and S53, subtilisin, kexin,sedolisin Tax=Nitrosospira sp. APG3 RepID=M5DJ82_9PROT
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM3_127_b2_sep16_scaffold_513_14
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12774..12983)
DNA (210bp) protein (70aa)
hypothetical protein Tax=Prochlorothrix hollandica RepID=UPI00034CDDE8
Uncharacterized protein family UPF0150
Tax=RBG_16_Gammaproteobacteria_51_14_curated
PLM3_127_b2_sep16_scaffold_513_15
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13218..14888)
DNA (1671bp) protein (557aa)
Large repetitive protein Tax=Ralstonia solanacearum FQY_4 RepID=M4ULS1_RALSL
Large repetitive protein
Large repetitive protein {ECO:0000313|EMBL:AGH87184.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
PLM3_127_b2_sep16_scaffold_513_16
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15021..16358)
DNA (1338bp) protein (446aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
PLM3_127_b2_sep16_scaffold_513_17
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16490..17008)
DNA (519bp) protein (173aa)
hypothetical protein Tax=Aureimonas ureilytica RepID=UPI00036D099E
hemolysin-type calcium-binding region
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:BAM87451.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM3_127_b2_sep16_scaffold_513_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17876..19585
DNA (1710bp) protein (570aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00037FAE39
proteases secretion ATP-binding protein PrtD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_513_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19594..20928
DNA (1335bp) protein (445aa)
Type I secretion membrane fusion protein, HlyD family Tax=Burkholderia ambifaria IOP40-10 RepID=B1FD82_9BURK
type I secretion membrane fusion , HlyD family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_513_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21068..21424
DNA (357bp) protein (119aa)
Thiamine-biosynthesis protein ThiS Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SH09_THIDA
thiamine-biosynthesis protein ThiS
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_513_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21531..22334
DNA (804bp) protein (268aa)
Thiazole synthase Tax=Nitrosomonas sp. AL212 RepID=F9ZI71_9PROT
thiazole biosynthesis family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_513_22
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22728..23447
DNA (720bp) protein (240aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase Tax=Azoarcus sp. (strain BH72) RepID=TRMB_AZOSB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_513_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23659..24780)
DNA (1122bp) protein (374aa)
Oxygen-independent coproporphyrinogen III oxidase Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IX86_PSEUL
oxygen-independent coproporphyrinogen III oxidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_513_24
unknown

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comp(25002..25319)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_513_25
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25316..25723)
DNA (408bp) protein (136aa)
membrane protein Tax=Thiobacillus denitrificans RepID=UPI00037AB766
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI29361.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
PLM3_127_b2_sep16_scaffold_513_26
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25733..26038)
DNA (306bp) protein (102aa)
Putative uncharacterized protein Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIQ3_GALCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL56216.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
PLM3_127_b2_sep16_scaffold_513_27
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26154..26747)
DNA (594bp) protein (198aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Non-canonical purine NTP pyrophosphatase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GXA5_METFK
Ham1-like protein
PLM3_127_b2_sep16_scaffold_513_28
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26985..27707)
DNA (723bp) protein (241aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Ribonuclease PH Tax=Sulfuricella denitrificans skB26 RepID=S6A9M4_9PROT
PLM3_127_b2_sep16_scaffold_513_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27867..28733
DNA (867bp) protein (289aa)
Protein YicC Tax=Nitrosospira sp. APG3 RepID=M5DFA6_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying items 1-30 of 83 in total

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