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PLM3_127_b2_sep16_scaffold_6897

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6897_1
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..416)
DNA (414bp) protein (138aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003791ECC
cytochrome c class I
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3_127_b2_sep16_scaffold_6897_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(767..1132)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIT5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69442.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b2_sep16_scaffold_6897_3
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1239..1871)
DNA (633bp) protein (211aa)
Putative uncharacterized protein Tax=Thermincola potens (strain JR) RepID=D5X7Q4_THEPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG82624.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM3_127_b2_sep16_scaffold_6897_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2133..2780)
DNA (648bp) protein (216aa)
putative cytochrome c bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_6897_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2807..3595)
DNA (789bp) protein (263aa)
Hypothetical (Diheme) protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome C oxidase subunit II
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_6897_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3611..4237)
DNA (627bp) protein (209aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_6897_7
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4239..4625
DNA (387bp) protein (129aa)
Putative pyruvate radical-activating enzyme Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DF33_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGV50764.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
PLM3_127_b2_sep16_scaffold_6897_8
unknown

Not on your lists

4711..4884
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6897_9
unknown

Not on your lists

5112..5339
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6897_10
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(5558..6391)
DNA (834bp) protein (278aa)
Cytochrome c class I Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7B6_HERA2
cytochrome c class I
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_127_b2_sep16_scaffold_6897_trna_1
unknown

Not on your lists

comp(6524..6595)
DNA (72bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_6897_11
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

6950..8062
DNA (1113bp) protein (371aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I723_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01061.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_6897_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(8134..8871)
DNA (738bp) protein (246aa)
Peptidase C26 family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I008_CALAS
peptidase C26 family protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_6897_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(8890..9690)
DNA (801bp) protein (267aa)
periplasmic serine protease (EC:3.4.21.-)
hypothetical protein bin=bin3_NC10 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_6897_14
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

9966..11306
DNA (1341bp) protein (447aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Glutamine synthetase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I424_CALAS
glnA; glutamine synthetase
PLM3_127_b2_sep16_scaffold_6897_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11443..12072)
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7Z5_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39866.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_127_b2_sep16_scaffold_6897_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

12215..12649
DNA (435bp) protein (145aa)
transmembrane_regions 9..31 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_6897_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

12741..13424
DNA (684bp) protein (228aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT bin=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
winged helix family two component transcriptional regulator
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_6897_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

13425..14552
DNA (1128bp) protein (376aa)
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
histidine kinase (EC:2.7.13.3)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_6897_19
unknown

Not on your lists

14588..15163
DNA (576bp) protein (192aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6897_20
unknown

Not on your lists

comp(15267..15566)
DNA (300bp) protein (100aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6897_21
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(15593..16729)
DNA (1137bp) protein (379aa)
GGDEF domain protein Tax=Thermus sp. CCB_US3_UF1 RepID=G8N932_9DEIN
diguanylate cyclase
GGDEF domain protein {ECO:0000313|EMBL:AEV15410.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. CCB_US3_UF1.;"
PLM3_127_b2_sep16_scaffold_6897_22
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(16844..17047)
DNA (204bp) protein (68aa)
Uncharacterized protein bin=GWD2_Chloroflexi_49_16 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
PLM3_127_b2_sep16_scaffold_6897_23
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(17138..17599)
DNA (462bp) protein (154aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00035C8864
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM3_127_b2_sep16_scaffold_6897_24
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(17583..18107)
DNA (525bp) protein (175aa)
Putative nucleotidyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHL7_CHLTF
putative nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AEP12681.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3_127_b2_sep16_scaffold_6897_25
RLO_PLX_64_10, Bacteria

Not on your lists

comp(18149..20899)
DNA (2751bp) protein (917aa)
Aconitate hydratase 1 Tax=uncultured candidate division OP1 bacterium RepID=H5SMH3_9BACT
aconitate hydratase 1
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_6897_26
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21103..23541
DNA (2439bp) protein (813aa)
UPI0003D1B8B2 related cluster Tax=unknown RepID=UPI0003D1B8B2
PAS domain S-box {ECO:0000313|EMBL:ETA67731.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
PAS domain S-box
PLM3_127_b2_sep16_scaffold_6897_27
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

23538..24452
DNA (915bp) protein (305aa)
LysR family transcriptional regulator Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67SW7_SYMTH
LysR family transcriptional regulator
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_6897_28
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(24444..24803)
DNA (360bp) protein (120aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_6897_29
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(25169..25936)
DNA (768bp) protein (256aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying items 1-30 of 35 in total

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