ggKbase home page

PLM3_127_b2_sep16_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_129_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..475)
DNA (474bp) protein (158aa)
HNH endonuclease Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7D0_ANADF
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ABS24626.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_129_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1496..4435
DNA (2940bp) protein (980aa)
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:ABS28235.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ABS28235.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Non-specific serine/threonine protein kinase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHN9_ANADF
non-specific serine/threonine protein kinase
PLM3_127_b2_sep16_scaffold_129_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4446..5312
DNA (867bp) protein (289aa)
Zinc finger SWIM domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHP0_ANADF
zinc finger SWIM domain-containing protein
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ABS28236.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_129_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5393..8614
DNA (3222bp) protein (1074aa)
Uncharacterized protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFR1_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG75188.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM3_127_b2_sep16_scaffold_129_5
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8611..11976
DNA (3366bp) protein (1122aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
UvrD/REP helicase Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J8Q4_ANAD2
UvrD/REP helicase
PLM3_127_b2_sep16_scaffold_129_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12057..12527
DNA (471bp) protein (157aa)
phosphatidylethanolamine-binding protein Tax=Cupriavidus sp. BIS7 RepID=UPI000318D88D
PEBP family protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_129_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12825..13196
DNA (372bp) protein (124aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF57_ANADF
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABS27353.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_129_8
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13278..13661
DNA (384bp) protein (128aa)
Glycosyl hydrolase Tax=Streptomyces RepID=V4J565_9ACTO
Glycosyl hydrolase {ECO:0000313|EMBL:ESQ07425.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
Glycosyl hydrolase
PLM3_127_b2_sep16_scaffold_129_9
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

13735..14553
DNA (819bp) protein (273aa)
Methyltransferase type 11 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FKJ3_DESAA
type 11 methyltransferase
Tax=RBG_16_NC10_65_8_curated
PLM3_127_b2_sep16_scaffold_129_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14663..15118)
DNA (456bp) protein (152aa)
Putative uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IDN4_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC82694.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM3_127_b2_sep16_scaffold_129_11
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15217..16482)
DNA (1266bp) protein (422aa)
Glycosyl transferase, family 2 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IDN3_ANADE
Poly-beta-1,6-N-acetyl-D-glucosamine synthase {ECO:0000313|EMBL:GAO01702.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
N-glycosyltransferase
PLM3_127_b2_sep16_scaffold_129_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16492..18459)
DNA (1968bp) protein (656aa)
Polysaccharide deacetylase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IDP0_ANADE
Polysaccharide deacetylase {ECO:0000313|EMBL:ABC82696.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
polysaccharide deacetylase
PLM3_127_b2_sep16_scaffold_129_13
unknown

Not on your lists

18707..19432
DNA (726bp) protein (242aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_129_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19335..20051)
DNA (717bp) protein (239aa)
Exonuclease RNase T and DNA polymerase III Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHL1_ANADF
exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:ABS28207.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_129_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20062..21987)
DNA (1926bp) protein (642aa)
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHL2_ANADF
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase {ECO:0000313|EMBL:ABS28208.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_129_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22147..23877
DNA (1731bp) protein (577aa)
Putative PAS/PAC sensor protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHL3_ANADF
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABS28209.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_129_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24116..25255
DNA (1140bp) protein (380aa)
Secretion protein HlyD Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IK24_ANADE
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABC82007.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM3_127_b2_sep16_scaffold_129_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25286..28414
DNA (3129bp) protein (1043aa)
Acriflavin resistance protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H937_ANADF
acriflavin resistance protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_129_19
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28534..29397)
DNA (864bp) protein (288aa)
UspA domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H942_ANADF
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ABS25238.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_129_20
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29680..30720
DNA (1041bp) protein (347aa)
GTP-binding protein YchF Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG11_CHLTF
GTP-binding protein YchF
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_127_b2_sep16_scaffold_129_21
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30737..33067
DNA (2331bp) protein (777aa)
Malate synthase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGG3_ANADE
Malate synthase 1, glyoxysomal {ECO:0000313|EMBL:GAO02690.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
malate synthase
PLM3_127_b2_sep16_scaffold_129_22
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33070..34572
DNA (1503bp) protein (501aa)
Methylmalonate-semialdehyde dehydrogenase Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULK0_ANASK
methylmalonate-semialdehyde dehydrogenase
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ACG72858.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM3_127_b2_sep16_scaffold_129_23
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34620..35831
DNA (1212bp) protein (404aa)
Extracellular ligand-binding receptor Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LF13_SYNFM
extracellular ligand-binding receptor
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_129_24
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35851..36717
DNA (867bp) protein (289aa)
Branched-chain amino acid ABC transporter, membrane protein Tax=Geobacter sulfurreducens RepID=D7AKJ9_GEOSK
branched-chain amino acid ABC transporter membrane protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_129_25
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36714..37703
DNA (990bp) protein (330aa)
Inner-membrane translocator Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJA7_ANASK
inner-membrane translocator
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_129_26
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37690..38418
DNA (729bp) protein (243aa)
Branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) bin=GWC2_Methylomirabilis_70_24 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative branched-chain amino acid ABC transporter, ATP-binding protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM3_127_b2_sep16_scaffold_129_27
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38421..39125
DNA (705bp) protein (235aa)
ABC-type branched-chain amino acid transport systems, ATPase component bin=GWF2_Methylomirabilis_70_14 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LivF; ABC-type branched-chain amino acid transport systems, ATPase component
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_129_28
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39161..40825)
DNA (1665bp) protein (555aa)
ABC transporter related Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHP4_ANADF
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO02667.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
putative ABC transporter ATP-binding protein
PLM3_127_b2_sep16_scaffold_129_29
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40927..41721)
DNA (795bp) protein (265aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHW4_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS28310.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_129_30
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41930..42991)
DNA (1062bp) protein (354aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Ferrochelatase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGD5_HALO1
Displaying items 1-30 of 51 in total

View Taxonomy