ggKbase home page

PLM3_127_b2_sep16_scaffold_4262

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4262_1
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..985
DNA (984bp) protein (328aa)
Protein translocase subunit SecY Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P312_AROAE
secY; preprotein translocase subunit SecY
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_4262_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1175..1288
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGD0_COLFT
rpmJ; 50S ribosomal protein L36
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_4262_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1362..1745
DNA (384bp) protein (128aa)
30S ribosomal protein S13 Tax=Azoarcus sp. KH32C RepID=H0PUI7_9RHOO
rpsM; 30S ribosomal protein S13
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_4262_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1767..2174
DNA (408bp) protein (136aa)
30S ribosomal protein S11 Tax=Uliginosibacterium gangwonense RepID=UPI00036BF3BE
rpsK; 30S ribosomal protein S11
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_4262_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2185..2814
DNA (630bp) protein (210aa)
30S ribosomal protein S4 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00038270A4
rpsD; 30S ribosomal protein S4
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_4262_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2865..3860
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha Tax=Uliginosibacterium gangwonense RepID=UPI00036748A9
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3_127_b2_sep16_scaffold_4262_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3875..4273
DNA (399bp) protein (133aa)
50S ribosomal protein L17 Tax=Nitrosospira sp. APG3 RepID=M5DMF3_9PROT
rplQ; 50S ribosomal protein L17
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_4262_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4288..5559)
DNA (1272bp) protein (424aa)
ttuD; hydroxypyruvate reductase (EC:1.1.1.81)
D-glycerate 2-kinase Tax=Nitrosospira sp. APG3 RepID=M5DFU9_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_4262_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5642..6484)
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CU0_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_4262_10
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6539..7579)
DNA (1041bp) protein (347aa)
gtdA; gentisate 1,2-dioxygenase (EC:1.13.11.4)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI000303E3C5
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_127_b2_sep16_scaffold_4262_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8033..9265
DNA (1233bp) protein (411aa)
Uncharacterized protein Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4F3_POLGS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Displaying 11 items

View Taxonomy