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PLM3_127_b2_sep16_scaffold_3623

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3623_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..325)
DNA (324bp) protein (108aa)
Transcriptional regulator, TetR family protein Tax=Synechococcus sp. PCC 7335 RepID=B4WS51_9SYNE
Transcriptional regulator, TetR family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3623_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(369..1787)
DNA (1419bp) protein (473aa)
GTPase Der Tax=Nitrosospira sp. APG3 RepID=M5DKY3_9PROT
engA; GTP-binding protein EngA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3623_3
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1784..2899)
DNA (1116bp) protein (372aa)
Outer membrane protein assembly factor BamB Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI68_AZOSU
outer membrane assembly lipoprotein YfgL
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3623_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2896..3534)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI69_AZOSU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3623_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3535..4875)
DNA (1341bp) protein (447aa)
ctc:CTC01958 hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
hisS; histidyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3623_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4877..6109)
DNA (1233bp) protein (411aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3623_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6117..6923)
DNA (807bp) protein (269aa)
XRE family transcriptional regulator Tax=Sulfuricella denitrificans skB26 RepID=S6AHJ5_9PROT
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_3623_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6916..7695)
DNA (780bp) protein (260aa)
Type IV pilus biogenesis/stability protein PilW Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI73_AZOSU
type IV pilus biogenesis/stability protein PilW
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3623_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7692..8777)
DNA (1086bp) protein (362aa)
50S rRNA methyltransferase Tax=Azoarcus toluclasticus RepID=UPI0003605A45
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3623_10
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8774..9199)
DNA (426bp) protein (142aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
nucleoside diphosphate kinase Tax=Caldimonas manganoxidans RepID=UPI000373044E
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_127_b2_sep16_scaffold_3623_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9231..10139)
DNA (909bp) protein (303aa)
tRNA(Ile)-lysidine synthase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN28_ACCPU
tRNA(Ile)-lysidine synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3623_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10433..11401)
DNA (969bp) protein (323aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Azoarcus sp. (strain BH72) RepID=ACCA_AZOSB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_3623_13
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11414..11581)
DNA (168bp) protein (56aa)
hypothetical protein Tax=Xanthomonas sp. SHU308 RepID=UPI00035C0CA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC47869.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
PLM3_127_b2_sep16_scaffold_3623_14
unknown

Not on your lists

11855..11947
DNA (93bp) protein (31aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3623_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12309..12926)
DNA (618bp) protein (206aa)
DNA-3-methyladenine glycosylase II Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HT2_DECAR
HhH-GPD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 15 items

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