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PLM3_127_b2_sep16_scaffold_6947

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6947_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..485
DNA (483bp) protein (161aa)
Fumarylacetoacetate (FAA) hydrolase Tax=Marinobacter adhaerens (strain HP15) RepID=E4PI97_MARAH
fumarylacetoacetate (FAA) hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

482..1267
DNA (786bp) protein (262aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D6885
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1257..2015
DNA (759bp) protein (253aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D6885
dehydrogenase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_4
unknown

Not on your lists

comp(2012..2158)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6947_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2262..2852
DNA (591bp) protein (197aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00035F1ED9
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_6947_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2849..3724)
DNA (876bp) protein (292aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI0003813F09
ABC-type transport system periplasmic substrate-binding protein (probable substrate sulfonate/nitrate/taurine)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_7
unknown

Not on your lists

comp(3735..4409)
DNA (675bp) protein (225aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6947_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4438..5493
DNA (1056bp) protein (352aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI0003829888
glucose sorbosone dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_9
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5490..5903
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9W9D2_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ05192.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
Putative translation initiation inhibitor, yjgF family
PLM3_127_b2_sep16_scaffold_6947_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6004..6504
DNA (501bp) protein (167aa)
Putative membrane-anchored protein Tax=Rhodovulum sp. PH10 RepID=J6JF82_9RHOB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_6947_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6510..7154
DNA (645bp) protein (215aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DFAE8
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7221..7859
DNA (639bp) protein (213aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035CC41D
response regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7859..9043
DNA (1185bp) protein (395aa)
Osmosensitive K+ channel histidine kinase KdpD Tax=Rhodovulum sp. PH10 RepID=J5PUY1_9RHOB
two component sensor histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9033..9899)
DNA (867bp) protein (289aa)
hypothetical protein Tax=Sphingobium xenophagum RepID=UPI0002F28EA9
4,5-dihydroxyphthalate decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_15
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9935..10891
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Burkholderia sp. Ch1-1 RepID=I2IQM3_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_6947_16
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10824..11261)
DNA (438bp) protein (146aa)
Transcriptional regulator Tax=Polaromonas sp. CF318 RepID=J2LFD5_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL83868.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
transcriptional regulator MarR family
PLM3_127_b2_sep16_scaffold_6947_17
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11285..12439)
DNA (1155bp) protein (385aa)
4,5-dihydroxyphthalate dehydrogenase (EC:1.3.1.64)
4,5-dihydroxyphthalate dehydrogenase {ECO:0000313|EMBL:ABE43841.1}; EC=1.3.1.64 {ECO:0000313|EMBL:ABE43841.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
4,5-dihydroxyphthalate dehydrogenase Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CA1_POLSJ
PLM3_127_b2_sep16_scaffold_6947_18
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12472..13761
DNA (1290bp) protein (430aa)
Putative phthalate dioxygenase Tax=Sphingomonas sp. KA1 RepID=Q0KJ88_9SPHN
Putative phthalate dioxygenase {ECO:0000313|EMBL:BAF03454.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. KA1.;"
MarR family transcriptional regulator
PLM3_127_b2_sep16_scaffold_6947_19
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13724..14452
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Pandoraea sp. SD6-2 RepID=R7WYJ7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE97310.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
PLM3_127_b2_sep16_scaffold_6947_20
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14473..14613)
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS57821.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Putative uncharacterized protein bin=BDI species=Aggregatibacter actinomycetemcomitans genus=Aggregatibacter taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PLM3_127_b2_sep16_scaffold_6947_21
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15175..15510)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F8S8_9BACT
Tax=RBG_16_Gallionellales_57_15_curated
PLM3_127_b2_sep16_scaffold_6947_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16078..17478)
DNA (1401bp) protein (467aa)
cardiolipin synthetase 2 (EC:2.7.8.-)
Cardiolipin synthetase 2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF67_CHLTF
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17518..18465
DNA (948bp) protein (316aa)
Putative exported protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_6947_24
unknown

Not on your lists

18465..18710
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6947_25
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18729..19535)
DNA (807bp) protein (269aa)
Alpha/beta hydrolase Tax=Burkholderia sp. SJ98 RepID=K8R944_9BURK
Alpha/beta hydrolase {ECO:0000313|EMBL:EKS70605.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
alpha/beta hydrolase fold family protein
PLM3_127_b2_sep16_scaffold_6947_26
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19537..20646
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0003004C9A
Uncharacterized protein {ECO:0000313|EMBL:KGD93354.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
monooxygenase
PLM3_127_b2_sep16_scaffold_6947_27
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20639..21013)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002FF7BD5
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AJF01203.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
PLM3_127_b2_sep16_scaffold_6947_28
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21030..21827)
DNA (798bp) protein (266aa)
Putative permease of ABC transporter Tax=Pseudomonas sp. CF161 RepID=S6JH73_9PSED
putative ABC transporter permease protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_127_b2_sep16_scaffold_6947_29
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21793..22746)
DNA (954bp) protein (318aa)
nitrate ABC transporter substrate-binding protein Tax=Herbaspirillum lusitanum RepID=UPI000311FED1
NMT1-like family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_127_b2_sep16_scaffold_6947_30
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22743..23501)
DNA (759bp) protein (253aa)
hypothetical protein Tax=Pandoraea sp. B-6 RepID=UPI000344EA0A
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC19183.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
Displaying items 1-30 of 36 in total

View Taxonomy