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PLM3_127_b2_sep16_scaffold_1795

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1795_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..367
DNA (366bp) protein (122aa)
RNA polymerase sigma factor RpoD Tax=Uliginosibacterium gangwonense RepID=UPI000382977B
rpoD; RNA polymerase sigma factor rpoD, Sigma-70
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

364..627
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_127_b2_sep16_scaffold_1795_trna_1
unknown

Not on your lists

689..762
DNA (74bp)
transferRNA Met
PLM3_127_b2_sep16_scaffold_1795_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

872..1192
DNA (321bp) protein (107aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YS7_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_127_b2_sep16_scaffold_1795_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1242..3215
DNA (1974bp) protein (658aa)
hyfB; hydrogenase 4 subunit B (EC:1.-.-.-)
oxidoreductase Tax=Rhizobium leguminosarum RepID=UPI00036AC732
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_1795_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3206..4162
DNA (957bp) protein (319aa)
Formate hydrogenlyase subunit 4 Tax=Rhizobium sp. CF142 RepID=J1T0Q8_9RHIZ
hycD; putative hydrogenase protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4162..4824
DNA (663bp) protein (221aa)
Putative hydrogenase-4 component E Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUM8_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4821..6281
DNA (1461bp) protein (487aa)
hyfF; hydrogenase 4 subunit F (EC:1.-.-.-)
Hydrogenase 4, membrane subunit Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVZ2_9BRAD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6283..7680
DNA (1398bp) protein (466aa)
UPI0003CEE45A related cluster Tax=unknown RepID=UPI0003CEE45A
NADH-ubiquinone oxidoreductase chain 49kDa
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7670..8212
DNA (543bp) protein (181aa)
NADH ubiquinone oxidoreductase, 20 kDa subunit Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132B8_RHOPS
NADH ubiquinone oxidoreductase, 20 kDa subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8209..8946)
DNA (738bp) protein (246aa)
SapC family protein Tax=Burkholderia pseudomallei RepID=S5P1N1_BURPE
sapC family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_1795_trna_2
unknown

Not on your lists

8995..9067
DNA (73bp)
transferRNA Ala
PLM3_127_b2_sep16_scaffold_1795_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9135..9476
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0Q4R4_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_1795_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9506..10525
DNA (1020bp) protein (340aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS domain S-box Tax=Herbaspirillum sp. CF444 RepID=J2LQM6_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10536..11180
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ0_9BACT
two component LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11254..11574)
DNA (321bp) protein (107aa)
Putative transcriptional regulator Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QND8_AZOSU
putative transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11593..11985
DNA (393bp) protein (131aa)
Conserved hypothetical endoribonuclease L-PSP Tax=Azoarcus sp. (strain BH72) RepID=A1K2N8_AZOSB
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11982..13970
DNA (1989bp) protein (663aa)
ATP-dependent DNA helicase RecG Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QND6_AZOSU
ATP-dependent DNA helicase RecG
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_127_b2_sep16_scaffold_1795_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13985..14869
DNA (885bp) protein (295aa)
ubiA; p-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate polyprenyltransferase Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000362B100
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14854..15387
DNA (534bp) protein (178aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_1795_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15384..16199
DNA (816bp) protein (272aa)
3-polyprenyl-4-hydroxybenzoate decarboxylase Tax=Thiobacillus thioparus RepID=UPI00036BF154
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 21 items

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