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PLM3_127_b2_sep16_scaffold_3997

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3997_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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528..1463
DNA (936bp) protein (312aa)
Periplasmic solute-binding protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9I4_9PROT
periplasmic solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_127_b2_sep16_scaffold_3997_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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1460..2230
DNA (771bp) protein (257aa)
ABC-3 protein Tax=Sulfuricella denitrificans skB26 RepID=S6AEG4_9PROT
Zinc/manganese transporter permease {ECO:0000313|EMBL:GAO37210.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ABC-3 protein
PLM3_127_b2_sep16_scaffold_3997_3
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2304..2651
DNA (348bp) protein (116aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037272CE
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACA93365.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
PLM3_127_b2_sep16_scaffold_3997_4
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2648..3094
DNA (447bp) protein (149aa)
Putative glyoxalase/bleomycin resistance protein/dioxygenase Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RC50_CUPTR
glyoxalase/bleomycin resistance protein/dioxygenase
Putative glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CAQ72475.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
PLM3_127_b2_sep16_scaffold_3997_5
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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3103..3543
DNA (441bp) protein (147aa)
GCN5-related N-acetyltransferase family protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2Y1_METPS
GCN5-related N-acetyltransferase family protein
GCN5-related N-acetyltransferase family protein {ECO:0000313|EMBL:BAI63053.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
PLM3_127_b2_sep16_scaffold_3997_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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3552..4058
DNA (507bp) protein (169aa)
Protein-tyrosine phosphatase, low molecular weight Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUU7_NITHN
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:CDH44022.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
protein-tyrosine phosphatase, low molecular weight
PLM3_127_b2_sep16_scaffold_3997_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4051..4608
DNA (558bp) protein (186aa)
Transmembrane ABC transporter protein, major intrinsic protein Tax=Cupriavidus basilensis OR16 RepID=H1SDC2_9BURK
MIP family channel protein {ECO:0000313|EMBL:AKC87957.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
putative transmembrane abc transporter protein, Major intrinsic protein
PLM3_127_b2_sep16_scaffold_3997_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4712..5275
DNA (564bp) protein (188aa)
Phosphoglycerate mutase family protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q099X6_STIAD
phosphoglycerate mutase family protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EAU68528.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3_127_b2_sep16_scaffold_3997_9
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

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comp(5269..5730)
DNA (462bp) protein (154aa)
Peroxiredoxin Tax=Leptolyngbya sp. Heron Island J RepID=U9VU00_9CYAN
peroxiredoxin
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
PLM3_127_b2_sep16_scaffold_3997_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5714..6211)
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase bin=GWA2_Ignavibacteria_55_11 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3_127_b2_sep16_scaffold_3997_trna_1
unknown

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6345..6417
DNA (73bp)
transferRNA Ala
PLM3_127_b2_sep16_scaffold_3997_trna_2
unknown

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6441..6513
DNA (73bp)
transferRNA Arg
PLM3_127_b2_sep16_scaffold_3997_11
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6539..8365)
DNA (1827bp) protein (609aa)
Putative uncharacterized protein Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0THI6_HELMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ83424.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
PLM3_127_b2_sep16_scaffold_3997_12
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8461..9558
DNA (1098bp) protein (366aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
GDP-mannose 4,6-dehydratase Tax=Thioalkalivibrio sp. ALJT RepID=UPI0003708240
GDP-mannose 4,6-dehydratase
PLM3_127_b2_sep16_scaffold_3997_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9551..10492
DNA (942bp) protein (314aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
wcaG; GDP-fucose synthetase (EC:1.1.1.271)
GDP-L-fucose synthase Tax=Desulfovibrio vulgaris RepID=E3IM64_DESVR
PLM3_127_b2_sep16_scaffold_3997_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10525..11037
DNA (513bp) protein (171aa)
OsmC family protein Tax=Oceanibaculum indicum P24 RepID=K2J0B0_9PROT
OsmC family protein {ECO:0000313|EMBL:EKE76321.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
redox protein, regulator of disulfide bond formation
PLM3_127_b2_sep16_scaffold_3997_15
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11206..11778)
DNA (573bp) protein (191aa)
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00723}; EC=4.4.1.22 {ECO:0000256|HAMAP-Rule:MF_00723};; S-(hydroxymethyl)glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00723}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
aldehyde-activating protein Tax=Bradyrhizobium japonicum RepID=UPI00037EB4B0
glutathione-dependent formaldehyde-activating enzyme
PLM3_127_b2_sep16_scaffold_3997_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11811..12920)
DNA (1110bp) protein (370aa)
alcohol dehydrogenase Tax=Leeia oryzae RepID=UPI0003797340
glutathione dependent formaldehyde dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3_127_b2_sep16_scaffold_3997_17
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12917..13771)
DNA (855bp) protein (285aa)
Extracellular solute-binding protein, family 3 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WSQ4_VEREI
extracellular solute-binding protein
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:ABM60661.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
PLM3_127_b2_sep16_scaffold_3997_18
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13872..14135)
DNA (264bp) protein (88aa)
Putative methanol dehydrogenase-like protein, cytochrome cL (XoxG) Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WEW9_BURSC
methanol dehydrogenase-like protein, cytochrome CL (XoxG)
Putative methanol dehydrogenase-like protein, cytochrome cL (XoxG) {ECO:0000313|EMBL:EDT12688.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
Displaying 20 items

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