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PLM3_127_b2_sep16_scaffold_6271

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6271_1
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1154
DNA (1152bp) protein (384aa)
Protein translocase subunit SecD Tax=Methylomonas methanica (strain MC09) RepID=F9ZYM1_METMM
protein-export membrane protein SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
PLM3_127_b2_sep16_scaffold_6271_2
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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1167..2099
DNA (933bp) protein (311aa)
Protein-export membrane protein SecF Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9B9_ALKEH
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
secF; preprotein translocase subunit SecF
PLM3_127_b2_sep16_scaffold_6271_3
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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2200..3162
DNA (963bp) protein (321aa)
Integral membrane protein, TerC family Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4B9_HALH1
TerC family integral membrane protein
Tax=CG_Delta_01
PLM3_127_b2_sep16_scaffold_6271_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3211..4545)
DNA (1335bp) protein (445aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00036A31D6
amino acid permease
Amino acid permease {ECO:0000313|EMBL:BAP57895.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PLM3_127_b2_sep16_scaffold_6271_5
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4572..5270)
DNA (699bp) protein (233aa)
Inositol monophosphatase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWC8_NITHN
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:ADE13778.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM3_127_b2_sep16_scaffold_6271_6
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5340..6071
DNA (732bp) protein (244aa)
tRNA (Cytidine/uridine-2'-O-)-methyltransferase TrmJ Tax=Methyloglobulus morosus KoM1 RepID=V5BVR5_9GAMM
RNA methyltransferase
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM3_127_b2_sep16_scaffold_6271_7
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

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6068..7579
DNA (1512bp) protein (504aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
cysteine desulfurase IscS (EC:2.8.1.7)
Cysteine desulfurase Tax=Luminiphilus syltensis NOR5-1B RepID=B8KXH0_9GAMM
PLM3_127_b2_sep16_scaffold_6271_8

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7600..7923
DNA (324bp) protein (108aa)
ISC system FeS cluster assembly protein Tax=mine drainage metagenome RepID=T1AH14_9ZZZZ
ISC system FeS cluster assembly protein {ECO:0000313|EMBL:EQD59796.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
iron-sulfur cluster assembly protein IscA
PLM3_127_b2_sep16_scaffold_6271_9
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8044..8475
DNA (432bp) protein (144aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
nucleoside diphosphate kinase Tax=Thioalkalivibrio sp. AKL11 RepID=UPI000373E796
PLM3_127_b2_sep16_scaffold_6271_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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8477..9592
DNA (1116bp) protein (372aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00037F8377
radical SAM protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_6271_11
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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9589..10359
DNA (771bp) protein (257aa)
Tfp pilus assembly protein PilF Tax=Nitrococcus mobilis Nb-231 RepID=A4BSV2_9GAMM
type IV pilus biogenesis/stability protein PilW
Tax=RBG_16_Gammaproteobacteria_51_14_curated
PLM3_127_b2_sep16_scaffold_6271_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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10356..11219
DNA (864bp) protein (288aa)
membrane protein Tax=Xanthomonas sacchari RepID=UPI000262B4D9
membrane protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_6271_13
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11230..12036
DNA (807bp) protein (269aa)
histidine--tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
histidyl-tRNA synthetase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003785E18
Displaying 13 items

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