name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_127_b2_sep16_scaffold_1596_1
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..1635)
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RNA polymerase sigma factor RpoD Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000368A0EB
RNA polymerase sigma-70 subunit RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
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PLM3_127_b2_sep16_scaffold_1596_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1733..3460)
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DNA primase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C469_NITHN
DNA primase
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
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PLM3_127_b2_sep16_scaffold_1596_3 |
Not on your lists |
comp(3550..4020)
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GatB/Yqey domain-containing protein (Fragment) Tax=mine drainage metagenome RepID=T0ZFP5_9ZZZZ
GatB/Yqey domain-containing protein {ECO:0000313|EMBL:EQD27709.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
|
|
PLM3_127_b2_sep16_scaffold_1596_4 |
Not on your lists |
comp(4096..4305)
|
Ribosomal protein S21 Tax=mine drainage metagenome RepID=T1AIA5_9ZZZZ
Ribosomal protein S21 {ECO:0000313|EMBL:EQD57007.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpsU; 30S ribosomal protein S21
|
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PLM3_127_b2_sep16_scaffold_1596_5
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4411..5436
|
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q07YT3_SHEFN
Tax=RBG_16_Gammaproteobacteria_57_12_curated
|
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PLM3_127_b2_sep16_scaffold_1596_6
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria
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Not on your lists |
5433..6299
|
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MC56_CALMQ
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
|
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PLM3_127_b2_sep16_scaffold_1596_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6325..7077)
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FolM Alternative dihydrofolate reductase 1 Tax=Nitrosospira sp. APG3 RepID=M5DTP7_9PROT
FolM Alternative dihydrofolate reductase 1 {ECO:0000313|EMBL:CCU62730.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
pteridine reductase
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PLM3_127_b2_sep16_scaffold_1596_8
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7141..8316
|
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C462_NITHN
Uncharacterized protein {ECO:0000313|EMBL:CDH47414.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
|
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PLM3_127_b2_sep16_scaffold_1596_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8367..9164
|
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri CCUG 29243.;"
Undecaprenyl-diphosphatase Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CW81_PSEST
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PLM3_127_b2_sep16_scaffold_1596_10
unknown
|
Not on your lists |
9151..10122
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_1596_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10139..11383)
|
Multifunctional CCA protein {ECO:0000255|HAMAP-Rule:MF_01261}; Includes:; CCA-adding enzyme {ECO:0000255|HAMAP-Rule:MF_01261}; EC=2.7.7.72 {ECO:0000255|HAMAP-Rule:MF_01261};; CCA tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA CCA-pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA adenylyl-/cytidylyl-transferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA-NT {ECO:0000255|HAMAP-Rule:MF_01261}; Includes:; 2'-nucleotidase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.3.- {ECO:0000255|HAMAP-Rule:MF_01261};; Includes:; 2',3'-cyclic phosphodiesterase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.4.- {ECO:0000255|HAMAP-Rule:MF_01261};; Includes:; Phosphatase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.3.- {ECO:0000255|HAMAP-Rule:MF_01261};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035CF5EB
tRNA nucleotidyltransferase
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PLM3_127_b2_sep16_scaffold_1596_12
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11417..12523
|
Putative aminopeptidase Tax=Beggiatoa alba B18LD RepID=I3CD35_9GAMM
putative aminopeptidase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
|
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PLM3_127_b2_sep16_scaffold_1596_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12454..13419)
|
NAD-dependent epimerase/dehydratase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUN4_NITHN
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADE13434.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
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PLM3_127_b2_sep16_scaffold_1596_14
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13502..14860)
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2-alkenal reductase {ECO:0000313|EMBL:ACL74025.1}; EC=1.3.1.74 {ECO:0000313|EMBL:ACL74025.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
2-alkenal reductase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPA5_THISH
2-alkenal reductase
|
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PLM3_127_b2_sep16_scaffold_1596_15
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14989..15423)
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heat shock protein Hsp20 Tax=Thioalkalivibrio sp. ALgr3 RepID=UPI00035DE17E
HSP20 family protein {ECO:0000313|EMBL:EHQ52895.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
heat-shock protein Hsp20
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|
PLM3_127_b2_sep16_scaffold_1596_16
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
15857..17317
|
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L5B3_FRAAD
NrdJa {ECO:0000313|EMBL:AKH19517.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
ribonucleoside-diphosphate reductase
|
|
PLM3_127_b2_sep16_scaffold_1596_17
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17327..18004
|
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWG8_PSEUU
NrdJa {ECO:0000313|EMBL:KGM53174.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
|
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PLM3_127_b2_sep16_scaffold_1596_18 |
Not on your lists |
18016..18744
|
Ribonucleotide reductase, alpha subunit (Fragment) Tax=mine drainage metagenome RepID=T1ATD4_9ZZZZ
Ribonucleotide reductase, alpha subunit {ECO:0000313|EMBL:EQD45280.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NrdJb
|
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PLM3_127_b2_sep16_scaffold_1596_19
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19435..21294
|
Lytic transglycosylase catalytic Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVC9_NITHN
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADE13557.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
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PLM3_127_b2_sep16_scaffold_1596_20
unknown
|
Not on your lists |
21291..21677
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_1596_21
unknown
|
Not on your lists |
comp(21687..22364)
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_1596_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
|
Not on your lists |
22405..23625
|
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIB3_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87963.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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PLM3_127_b2_sep16_scaffold_1596_23 |
Not on your lists |
23723..24229
|
ErfK/YbiS/YcfS/YnhG family protein (Fragment) Tax=mine drainage metagenome RepID=T1CH59_9ZZZZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EQD66520.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
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PLM3_127_b2_sep16_scaffold_1596_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
24506..25564
|
Uncharacterized protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SZ11_META2
LOG family protein {ECO:0000313|EMBL:KGF82049.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lysine decarboxylase
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PLM3_127_b2_sep16_scaffold_1596_25
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
25575..26279
|
Putative uncharacterized protein Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SQM6_HAHCH
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
|
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PLM3_127_b2_sep16_scaffold_1596_26
unknown
|
Not on your lists |
26469..26702
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_1596_27
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26705..27466)
|
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000378B4CC
cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACL71288.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
|
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PLM3_127_b2_sep16_scaffold_1596_28
unknown
|
Not on your lists |
27650..27766
|
This feature has no annotations |
|
PLM3_127_b2_sep16_scaffold_1596_29
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27887..29785
|
Chaperone protein HtpG Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=HTPG_SACD2
heat shock protein Hsp90
Chaperone protein HtpG {ECO:0000255|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000255|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000255|HAMAP-Rule:MF_00505}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
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PLM3_127_b2_sep16_scaffold_1596_30
Thermosynechococcus elongatus, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
29810..30214
|
methionine sulfoxide reductase B (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000255|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000255|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000255|HAMAP-Rule:MF_01400}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus elongatus (strain BP-1).;"
Peptide methionine sulfoxide reductase MsrB Tax=Thermosynechococcus elongatus (strain BP-1) RepID=MSRB_THEEB
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