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PLM3_127_b2_sep16_scaffold_13424

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_13424_1
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1..357)
DNA (357bp) protein (119aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
3-isopropylmalate dehydratase large subunit Tax=Nitrolancetus hollandicus Lb RepID=I4EGH5_9CHLR
leuC; 3-isopropylmalate dehydratase large subunit
PLM3_127_b2_sep16_scaffold_13424_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(405..1832)
DNA (1428bp) protein (476aa)
Pyruvate carboxyltransferase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7B9V1_MEISD
pyruvate carboxyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_13424_3
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(1829..2302)
DNA (474bp) protein (158aa)
SsrA-binding protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=SSRP_ACIC1
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_127_b2_sep16_scaffold_13424_4
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(2306..3592)
DNA (1287bp) protein (429aa)
Carboxy-terminal-processing protease Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I770_CALAS
ctpA; carboxy-terminal-processing protease
Tax=CG_Anaero_02
PLM3_127_b2_sep16_scaffold_13424_5
RLO_PLX_64_10, Bacteria

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comp(3609..3899)
DNA (291bp) protein (97aa)
id=4819348 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_13424_6
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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comp(3911..4309)
DNA (399bp) protein (133aa)
ctpA; carboxy-terminal-processing protease
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RBG_13_Chloroflexi_54_9_curated
PLM3_127_b2_sep16_scaffold_13424_7
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

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comp(4302..5210)
DNA (909bp) protein (303aa)
Carboxyl-terminal protease bin=GWB2_Chloroflexi_54_36 species=Fretibacterium fastidiosum genus=Fretibacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
ctpA; carboxy-terminal-processing protease
Tax=BJP_IG2102_ACD39_51_10
PLM3_127_b2_sep16_scaffold_13424_8
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(5431..8496)
DNA (3066bp) protein (1022aa)
Multi-sensor hybrid histidine kinase bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative two-component hybrid sensor and regulator
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3_127_b2_sep16_scaffold_13424_9
RLO_PLX_64_10, Bacteria

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comp(8972..9628)
DNA (657bp) protein (219aa)
DNA-binding response regulator, LuxR family Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7M1_DEHE1
LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_13424_10

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comp(9644..10531)
DNA (888bp) protein (296aa)
Marine sediment metagenome DNA, contig: S01H1_L00960 {ECO:0000313|EMBL:GAF72731.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sensor histidine kinase
Displaying 10 items

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