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PLM3_127_b2_sep16_scaffold_1963

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_1963_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(2..685)
DNA (684bp) protein (228aa)
Molybdopterin oxidoreductase, iron-sulfur binding subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XE59_9BACT
Fe-S-cluster-containing hydrogenase components 1-like protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_127_b2_sep16_scaffold_1963_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(835..1491)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEX3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27914.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_127_b2_sep16_scaffold_1963_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(1697..2422)
DNA (726bp) protein (242aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_127_b2_sep16_scaffold_1963_4
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

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comp(2657..3322)
DNA (666bp) protein (222aa)
Two component transcriptional regulator, LuxR family bin=GWB2_Chloroflexi_54_36 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
LuxR family transcriptional regulator
Tax=RBG_16_Chloroflexi_58_14_curated
PLM3_127_b2_sep16_scaffold_1963_5
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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comp(3298..4602)
DNA (1305bp) protein (435aa)
Integral membrane sensor signal transduction histidine kinase bin=GWB2_Chloroflexi_54_36 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
integral membrane sensor signal transduction histidine kinase
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3_127_b2_sep16_scaffold_1963_6
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(4714..7425)
DNA (2712bp) protein (904aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0L8_ANATU
PLM3_127_b2_sep16_scaffold_1963_7
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(8040..8795)
DNA (756bp) protein (252aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_56_8_curated
PLM3_127_b2_sep16_scaffold_1963_8
unknown

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comp(8792..9733)
DNA (942bp) protein (314aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1963_9

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10002..10538
DNA (537bp) protein (179aa)
Rab family GTPase Tax=Entamoeba nuttalli (strain P19) RepID=K2G7I2_ENTNP
Marine sediment metagenome DNA, contig: S03H2_L01786 {ECO:0000313|EMBL:GAH37771.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_1963_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(10513..11517)
DNA (1005bp) protein (335aa)
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
pyridoxal-5'-phosphate-dependent enzyme subunit beta
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_1963_11
unknown

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comp(11504..12178)
DNA (675bp) protein (225aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_1963_12
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(12547..13554)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IH79_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO79554.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
PLM3_127_b2_sep16_scaffold_1963_13
Cyanidioschyzon merolae, Cyanidioschyzon, Cyanidiales, Bangiophyceae, Eukaryota

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comp(13562..14467)
DNA (906bp) protein (302aa)
Similar to hedgehog protein Tax=Cyanidioschyzon merolae strain 10D RepID=M1V4W3_CYAME
Similar to hedgehog protein {ECO:0000313|EMBL:BAM79710.1}; species="Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon.;" source="Cyanidioschyzon merolae strain 10D.;"
hypothetical protein
Displaying 13 items

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