ggKbase home page

PLM3_127_b2_sep16_scaffold_3175

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3175_1
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..959
DNA (957bp) protein (319aa)
Beta-ketoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|SAAS:SAAS00048621}; EC=2.3.1.180 {ECO:0000256|SAAS:SAAS00048621};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2C8_DESAP
PLM3_127_b2_sep16_scaffold_3175_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1003..1527
DNA (525bp) protein (175aa)
putative CoA-binding protein; K06929 bin=bin1_lowGC species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_3175_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

1540..2832
DNA (1293bp) protein (431aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:EFH85464.1}; EC=2.5.1.49 {ECO:0000313|EMBL:EFH85464.1};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNS8_9CHLR
PLM3_127_b2_sep16_scaffold_3175_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2893..3537
DNA (645bp) protein (215aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC-type multidrug transport system, ATPase component Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUE0_9BURK
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EHR69600.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
PLM3_127_b2_sep16_scaffold_3175_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3534..4235
DNA (702bp) protein (234aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUD9_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69599.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ABC transporter
PLM3_127_b2_sep16_scaffold_3175_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4232..5731
DNA (1500bp) protein (500aa)
ABC-type uncharacterized transporter Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUD8_9BURK
ABC-type uncharacterized transporter {ECO:0000313|EMBL:EHR69598.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3175_7
unknown

Not on your lists

5710..6249
DNA (540bp) protein (180aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3175_8
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6332..7117)
DNA (786bp) protein (262aa)
Pantothenate kinase {ECO:0000313|EMBL:AKF81417.1}; EC=2.7.1.33 {ECO:0000313|EMBL:AKF81417.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
Type III pantothenate kinase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MR56_CORCM
coaX; pantothenate kinase
PLM3_127_b2_sep16_scaffold_3175_9
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7168..7977)
DNA (810bp) protein (270aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase Tax=Thermincola potens (strain JR) RepID=D5X9N7_THEPJ
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM3_127_b2_sep16_scaffold_3175_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8058..8999)
DNA (942bp) protein (314aa)
Fis family transcriptional regulator {ECO:0000313|EMBL:ETX08016.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Response regulator bin=GWF2_Nitrospirae_44_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
response regulator
PLM3_127_b2_sep16_scaffold_3175_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9357..10535
DNA (1179bp) protein (393aa)
Permease YjgP/YjgQ family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7W9_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:ETX08360.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
YjgP/YjgQ family permease
PLM3_127_b2_sep16_scaffold_3175_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10612..12246)
DNA (1635bp) protein (545aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1Z0P3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW93467.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3175_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12383..13462
DNA (1080bp) protein (360aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Riboflavin biosynthesis protein RibF Tax=Nitrospina gracilis 3/211 RepID=M1YWY2_9BACT
riboflavin biosynthesis protein RibF
PLM3_127_b2_sep16_scaffold_3175_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13513..14169
DNA (657bp) protein (219aa)
cmk; cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) (EC:2.7.4.14)
Cytidylate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX08026.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_3175_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14255..15970
DNA (1716bp) protein (572aa)
30S ribosomal protein S1 Tax=Nitrospina gracilis 3/211 RepID=M1YW03_9BACT
30S ribosomal protein S1 {ECO:0000313|EMBL:ETW99890.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rpsA; 30S ribosomal protein S1
Displaying 15 items

View Taxonomy