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PLM3_127_b2_sep16_scaffold_6847

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6847_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..466)
DNA (465bp) protein (155aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=DXR_GEOLS
PLM3_127_b2_sep16_scaffold_6847_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(506..1321)
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
cdsA; phosphatidate cytidylyltransferase
PLM3_127_b2_sep16_scaffold_6847_3
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(1413..2174)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003755A55
undecaprenyl diphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3_127_b2_sep16_scaffold_6847_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2214..2771)
DNA (558bp) protein (186aa)
Ribosome recycling factor {ECO:0000313|EMBL:ETX01483.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Ribosome-recycling factor bin=GWC2_Proteo_65_14_Ab886 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
frr; ribosome recycling factor
PLM3_127_b2_sep16_scaffold_6847_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2774..3496)
DNA (723bp) protein (241aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Uridylate kinase bin=CD_OP8_4m species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
uridylate kinase
PLM3_127_b2_sep16_scaffold_6847_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3542..4141)
DNA (600bp) protein (200aa)
elongation factor Ts Tax=Desulfurispora thermophila RepID=UPI0003653B1A
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
translation elongation factor Ts
PLM3_127_b2_sep16_scaffold_6847_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4164..5039)
DNA (876bp) protein (292aa)
30S ribosomal protein S2 Tax=Megamonas RepID=D4KD85_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
SSU ribosomal protein S2P
PLM3_127_b2_sep16_scaffold_6847_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5124..5519)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 Tax=Clostridiales RepID=R6VGZ2_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rpsI; 30S ribosomal protein S9
PLM3_127_b2_sep16_scaffold_6847_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5578..6012)
DNA (435bp) protein (145aa)
50S ribosomal protein L13 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N5J8_9FIRM
50S ribosomal protein L13 {ECO:0000313|EMBL:ETW96599.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
50S ribosomal protein L13
PLM3_127_b2_sep16_scaffold_6847_10
unknown

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comp(6031..6123)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6847_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6141..6524)
DNA (384bp) protein (128aa)
hypothetical protein Tax=Selenomonas bovis RepID=UPI0003758951
UPF0102 protein ETSY1_28290 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_6847_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6517..7083)
DNA (567bp) protein (189aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
ribonuclease HII Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B77761
Displaying 12 items

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