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PLM3_127_b2_sep16_scaffold_8133

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8133_1
bacterium UASB270, Bacteria

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comp(2..196)
DNA (195bp) protein (65aa)
Elongation factor Tu Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CE45_DESTA
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria.;" source="bacterium UASB270.;"
translation elongation factor 1A (EF-1A/EF-Tu)
PLM3_127_b2_sep16_scaffold_8133_trna_4
unknown

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comp(308..380)
DNA (73bp)
transferRNA Thr
PLM3_127_b2_sep16_scaffold_8133_trna_3
unknown

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comp(401..474)
DNA (74bp)
transferRNA Gly
PLM3_127_b2_sep16_scaffold_8133_trna_2
unknown

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comp(500..581)
DNA (82bp)
transferRNA Tyr
PLM3_127_b2_sep16_scaffold_8133_trna_1
unknown

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comp(646..717)
DNA (72bp)
transferRNA Thr
PLM3_127_b2_sep16_scaffold_8133_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(803..1702)
DNA (900bp) protein (300aa)
RNA methyltransferase, TrmH family, group 3 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJP2_SYNLT
23S rRNA (Guanosine-2'-O-)-methyltransferase {ECO:0000313|EMBL:ETX00948.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TrmH family RNA methyltransferase
PLM3_127_b2_sep16_scaffold_8133_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1724..2074)
DNA (351bp) protein (117aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
Bifunctional enzyme IspD/IspF Tax=Faecalibacterium sp. CAG:74 RepID=R7IDA0_9FIRM
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_8133_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2083..2793)
DNA (711bp) protein (237aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Syntrophus aciditrophicus (strain SB) RepID=ISPD_SYNAS
PLM3_127_b2_sep16_scaffold_8133_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2807..3832)
DNA (1026bp) protein (342aa)
Twitching motility protein PilT {ECO:0000313|EMBL:ETX00946.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Putative uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
twitching motility protein PilT
PLM3_127_b2_sep16_scaffold_8133_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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4534..4863
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW94671.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_127_b2_sep16_scaffold_8133_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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4908..5696
DNA (789bp) protein (263aa)
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Uncharacterized protein {ECO:0000313|EMBL:ETW94670.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Probable oxidoreductase (Short-chain dehydrogenase family) bin=GWF2_Methylomirabilis_70_14 species=Natronorubrum tibetense genus=Natronorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM3_127_b2_sep16_scaffold_8133_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5726..6568
DNA (843bp) protein (281aa)
Alpha/beta hydrolase fold bin=GWA2_Methylomirabilis_73_35 species=Burkholderia cenocepacia genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_8133_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6587..7447)
DNA (861bp) protein (287aa)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:ETX00942.1}; EC=2.4.2.19 {ECO:0000313|EMBL:ETX00942.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Nicotinate-nucleotide pyrophosphorylase Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJY6_9BACT
nicotinate-nucleotide pyrophosphorylase
PLM3_127_b2_sep16_scaffold_8133_10
unknown

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comp(7419..7766)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8133_11
unknown

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8027..8128
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 15 items

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