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PLM3_127_b2_sep16_scaffold_7620

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7620_1
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(1..186)
DNA (186bp) protein (62aa)
Glucose-methanol-choline oxidoreductase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQH1_CHIPD
glucose-methanol-choline oxidoreductase
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_127_b2_sep16_scaffold_7620_2
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(197..673)
DNA (477bp) protein (159aa)
hypothetical protein bin=CD_OP8_4m species=Nocardiopsis chromatogenes genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RBG_13_Aminicenantes_62_12_curated
PLM3_127_b2_sep16_scaffold_7620_3
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(710..1468)
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGY6_NOCSJ
hypothetical protein
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_127_b2_sep16_scaffold_7620_4
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1563..2180)
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Janibacter sp. HTCC2649 RepID=A3TI99_9MICO
Alcohol phosphatidyltransferase {ECO:0000313|EMBL:KGN35586.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
CDP-alcohol phosphatidyltransferase
PLM3_127_b2_sep16_scaffold_7620_5

Not on your lists

comp(2690..2989)
DNA (300bp) protein (100aa)
Marine sediment metagenome DNA, contig: S01H1_S17577 {ECO:0000313|EMBL:GAG27516.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_127_b2_sep16_scaffold_7620_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2931..4112)
DNA (1182bp) protein (394aa)
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_7620_7
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4109..5482)
DNA (1374bp) protein (458aa)
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_7620_8
unknown

Not on your lists

comp(5829..6059)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7620_9
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6056..6631)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor Tax=Plesiocystis pacifica SIR-1 RepID=A6G7V1_9DELT
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDM78044.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
PLM3_127_b2_sep16_scaffold_7620_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6636..7595)
DNA (960bp) protein (320aa)
von Willebrand factor, type A Tax=Plesiocystis pacifica SIR-1 RepID=A6G7V2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF07816.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
LPXTG-motif cell wall anchor domain-containing protein
PLM3_127_b2_sep16_scaffold_7620_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7692..9050)
DNA (1359bp) protein (453aa)
von Willebrand factor, type A Tax=Plesiocystis pacifica SIR-1 RepID=A6G7V2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF07816.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
serine/threonine protein kinase
PLM3_127_b2_sep16_scaffold_7620_12
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(9282..10949)
DNA (1668bp) protein (556aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_57_35 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
PLM3_127_b2_sep16_scaffold_7620_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11105..11926)
DNA (822bp) protein (274aa)
TPR repeat-containing protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U02_SOLUE
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ABJ86868.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_127_b2_sep16_scaffold_7620_14
unknown

Not on your lists

comp(12313..12930)
DNA (618bp) protein (206aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7620_15
candidate division Zixibacteria, Bacteria

Not on your lists

comp(12984..15377)
DNA (2394bp) protein (798aa)
Serine/threonine protein kinase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Serine/threonine protein kinase {ECO:0000313|EMBL:EQB63029.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
serine/threonin protein kinase
PLM3_127_b2_sep16_scaffold_7620_16
R_OP11_Amesbacteria_48_32, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(15514..16839)
DNA (1326bp) protein (442aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IMH1_9PLAN
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32_curated
PLM3_127_b2_sep16_scaffold_7620_17
RLO_PLX_64_10, Bacteria

Not on your lists

17196..17954
DNA (759bp) protein (253aa)
ApbE family lipoprotein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W11_SOLUE
ApbE family lipoprotein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_127_b2_sep16_scaffold_7620_18
unknown

Not on your lists

18144..18596
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7620_19
unknown

Not on your lists

18593..19390
DNA (798bp) protein (266aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7620_20
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

19384..21366
DNA (1983bp) protein (661aa)
Uncharacterized protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLP5_THISH
hypothetical protein
Tax=CG_Arma_01
PLM3_127_b2_sep16_scaffold_7620_21
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21392..21997
DNA (606bp) protein (202aa)
Thiol:disulfide interchange protein TlpA Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LL47_DINSH
tlpA; Thiol:disulfide interchange protein TlpA
Thiol:disulfide interchange protein TlpA {ECO:0000313|EMBL:ABV94796.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
PLM3_127_b2_sep16_scaffold_7620_22
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21994..22254
DNA (261bp) protein (87aa)
Putative lipoprotein Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QP40_GLANF
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AEP31748.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064).;"
PLM3_127_b2_sep16_scaffold_7620_23
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22296..23405
DNA (1110bp) protein (370aa)
Putative uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Deltaproteobacteria_55_19_curated
PLM3_127_b2_sep16_scaffold_7620_24

Not on your lists

23437..25086
DNA (1650bp) protein (550aa)
Putative uncharacterized protein Tax=uncultured bacterium W4-87b RepID=H9BWU4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AFD03266.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium W4-87b.;"
PLM3_127_b2_sep16_scaffold_7620_25
unknown

Not on your lists

25166..26602
DNA (1437bp) protein (479aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7620_26
unknown

Not on your lists

comp(26493..27233)
DNA (741bp) protein (247aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7620_27
unknown

Not on your lists

27298..27564
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7620_28
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27575..28273
DNA (699bp) protein (233aa)
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3_127_b2_sep16_scaffold_7620_29
unknown

Not on your lists

28276..29181
DNA (906bp) protein (302aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_7620_30
unknown

Not on your lists

29178..29618
DNA (441bp) protein (147aa)

This feature has no annotations

Displaying 30 items

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