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PLM3_127_b2_sep16_scaffold_3609

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3609_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3..386
DNA (384bp) protein (128aa)
Putative 3-methyladenine DNA glycosylase Tax=Pseudomonas psychrotolerans L19 RepID=H0JDF5_9PSED
DNA-3-methyladenine glycosylase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_3609_2
unknown

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comp(404..1105)
DNA (702bp) protein (234aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3609_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1361..2560)
DNA (1200bp) protein (400aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate coenzyme A ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_3609_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2557..3597)
DNA (1041bp) protein (347aa)
Threonine 3-dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT
Alcohol dehydrogenase GroES domain protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_3609_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3749..6688)
DNA (2940bp) protein (980aa)
fdhA1; formate dehydrogenase alpha subunit (EC:1.2.1.2)
Formate dehydrogenase alpha subunit Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUZ6_JANMA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_3609_6
unknown

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comp(7016..7186)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3609_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7340..8197)
DNA (858bp) protein (286aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_3609_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8191..9066)
DNA (876bp) protein (292aa)
hypothetical protein Tax=Prochlorothrix hollandica RepID=UPI00034DBB7C
cation transporter
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_3609_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9249..10403)
DNA (1155bp) protein (385aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AHG90154.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_3609_10
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10400..10726)
DNA (327bp) protein (109aa)
aroH; chorismate mutase (EC:5.4.99.5)
Protein-glutamate O-methyltransferase Tax=Paenibacillus polymyxa RepID=E3E4U5_PAEPS
Chorismate mutase {ECO:0000313|EMBL:KGP76244.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
PLM3_127_b2_sep16_scaffold_3609_11
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10770..11273
DNA (504bp) protein (168aa)
Thiamine-phosphate pyrophosphorylase Tax=uncultured prokaryote RepID=H5SLW3_9ZZZZ
thiamine-phosphate pyrophosphorylase
Tax=CG_Desulfovib_01
PLM3_127_b2_sep16_scaffold_3609_12
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11451..11879)
DNA (429bp) protein (143aa)
YceG-like family protein Tax=Clostridium bifermentans ATCC 638 RepID=T4VSL7_CLOBI
YceG-like family protein {ECO:0000313|EMBL:EQK43771.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
aminodeoxychorismate lyase
PLM3_127_b2_sep16_scaffold_3609_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11876..12364)
DNA (489bp) protein (163aa)
Aminodeoxychorismate lyase Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FJK2_DESAA
aminodeoxychorismate lyase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_3609_14
unknown

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12435..12680
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3609_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12946..14193)
DNA (1248bp) protein (416aa)
Transcription termination factor Rho Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A649_GEMAT
transcription termination factor Rho
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_3609_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14561..14743
DNA (183bp) protein (61aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_3609_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14826..15716)
DNA (891bp) protein (297aa)
Putative two-component response regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB66_GEMAT
putative two-component response regulator
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 17 items

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