ggKbase home page

PLM3_127_b2_sep16_scaffold_9362

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_9362_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
fabI; enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADQ6_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_9362_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

393..950
DNA (558bp) protein (186aa)
hypothetical protein; K03744 LemA protein bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_9362_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

947..2653
DNA (1707bp) protein (569aa)
hypothetical protein bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_9362_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2667..5210)
DNA (2544bp) protein (848aa)
permease Tax=Salisaeta longa RepID=UPI0003B41834
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_9362_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5207..5821)
DNA (615bp) protein (205aa)
ABC transporter related protein Tax=Fibrisoma limi BUZ 3 RepID=I2GPC3_9BACT
putative ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_9362_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5986..6558
DNA (573bp) protein (191aa)
Lipolytic protein G-D-S-L family Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEZ1_RHOM4
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ACY47441.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
PLM3_127_b2_sep16_scaffold_9362_7
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6641..7744)
DNA (1104bp) protein (368aa)
Putative cysteine desulfurase Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZIV6_9ACTO
Putative cysteine desulfurase {ECO:0000313|EMBL:EPH42619.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
class V aminotransferase
PLM3_127_b2_sep16_scaffold_9362_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7732..8409)
DNA (678bp) protein (226aa)
Transcriptional regulator, GntR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF38_CONWI
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB51755.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_127_b2_sep16_scaffold_9362_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8451..9377
DNA (927bp) protein (309aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003656F7C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_9362_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9394..9951
DNA (558bp) protein (186aa)
NADPH-dependent FMN reductase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAX4_ANADF
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ABS25870.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b2_sep16_scaffold_9362_11
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9915..10721)
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A8Z2_9PROT
2-methylisocitrate lyase {ECO:0000313|EMBL:KJV25151.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_9362_12
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10748..11176)
DNA (429bp) protein (143aa)
Peroxiredoxin, OsmC subfamily Tax=Desulfococcus multivorans DSM 2059 RepID=S7TZK9_DESML
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:EPR42517.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
osmC; peroxiredoxin osmC
PLM3_127_b2_sep16_scaffold_9362_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11212..13968)
DNA (2757bp) protein (919aa)
Peptidase M16 domain protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE46_RHOMR
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AEN72038.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM3_127_b2_sep16_scaffold_9362_14
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14052..14540)
DNA (489bp) protein (163aa)
Response regulator receiver domain protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XE9_RHOFD
response regulator receiver domain-containing protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
PLM3_127_b2_sep16_scaffold_9362_15
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14653..15699)
DNA (1047bp) protein (349aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
hypothetical protein Tax=Chlorogloeopsis RepID=UPI00037C363E
PAS domain S-box
Displaying 15 items

View Taxonomy