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PLM3_127_b2_sep16_scaffold_11836

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_11836_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3..227
DNA (225bp) protein (75aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_11836_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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286..1161
DNA (876bp) protein (292aa)
Uncharacterized iron-regulated protein bin=GWC2_Methylomirabilis_70_24 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_11836_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1158..1874)
DNA (717bp) protein (239aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_11836_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2003..2776
DNA (774bp) protein (258aa)
Pyridoxal phosphate phosphatase bin=GWC2_Methylomirabilis_70_24 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HAD family hydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_11836_5
R_OP11_Levybacteria_37_33, Levybacteria, Microgenomates, Bacteria

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2776..3474
DNA (699bp) protein (233aa)
Peptidase E Tax=uncultured bacterium RepID=K2CKH5_9BACT
peptidase E
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_33_curated
PLM3_127_b2_sep16_scaffold_11836_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3700..4137)
DNA (438bp) protein (146aa)
Protein tyrosine phosphatase bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
protein tyrosine phosphatase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_11836_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4182..4580)
DNA (399bp) protein (133aa)
Short-chain dehydrogenase/reductase SDR bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_11836_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4577..4978)
DNA (402bp) protein (134aa)
Short-chain dehydrogenase/reductase SDR bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_11836_9
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5078..5914)
DNA (837bp) protein (279aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00036D156E
putative dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:CCH33186.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_127_b2_sep16_scaffold_11836_10
unknown

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comp(5918..6013)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_11836_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(6030..7229)
DNA (1200bp) protein (400aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034D573C
eryF; cytochrome P450 107B1
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_127_b2_sep16_scaffold_11836_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7311..8732)
DNA (1422bp) protein (474aa)
Long-chain-fatty-acid--CoA ligase bin=GWF2_Methylomirabilis_70_14 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_11836_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8729..9469)
DNA (741bp) protein (247aa)
UbiD decarboxylase family protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 13 items

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