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PLM3_127_b2_sep16_Rokubacteria_68_9

PLM3_127cm_b2_sep2016_Rokubacteria_68_9
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  rokubacteria_ggkbase

Consensus taxonomy: Rokubacteria  →  Bacteria

Displaying items 351-400 of 674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_31905
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 2930 bp 68.46 7.53 92.87
PLM3_127_b2_sep16_scaffold_25062
Domain: Bacteria (75%)
4 3366 bp 69.07 10.29 92.87
PLM3_127_b2_sep16_scaffold_78325
Species: GWA2_Rokubacteria_70_23_curated (66.67%)
3 3143 bp 67.67 9.12 92.87
PLM3_127_b2_sep16_scaffold_33237
Species: GWC2_Rokubacteria_70_16_curated (50%)
6 5042 bp 71.22 7.74 92.88
PLM3_127_b2_sep16_scaffold_34195
Domain: Bacteria (80%)
5 2812 bp 65.86 8.00 92.92
PLM3_127_b2_sep16_scaffold_17364
Domain: Bacteria (57.14%)
7 4158 bp 67.80 9.70 93.00
PLM3_127_b2_sep16_scaffold_28177
Genus: Candidatus Entotheonella (50%)
4 3151 bp 66.99 10.38 93.02
PLM3_127_b2_sep16_scaffold_12120
Class: Betaproteobacteria (57.14%)
7 5678 bp 70.64 8.48 93.04
PLM3_127_b2_sep16_scaffold_23704
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 3475 bp 70.13 7.04 93.06
PLM3_127_b2_sep16_scaffold_22453
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 5109 bp 69.11 11.13 93.07
PLM3_127_b2_sep16_scaffold_66145
Phylum: Rokubacteria (80%)
5 4682 bp 67.68 10.16 93.10
PLM3_127_b2_sep16_scaffold_31539
Phylum: Rokubacteria (80%)
5 2950 bp 72.14 7.78 93.15
PLM3_127_b2_sep16_scaffold_51580
Phylum: Rokubacteria (50%)
8 3932 bp 67.70 8.43 93.16
PLM3_127_b2_sep16_scaffold_14051
Phylum: Rokubacteria (75%)
8 7065 bp 70.46 9.66 93.16
PLM3_127_b2_sep16_scaffold_56667
Domain: Bacteria (60%)
5 3248 bp 66.84 6.10 93.20
PLM3_127_b2_sep16_scaffold_11836
Species: GWA2_Rokubacteria_70_23_curated (53.85%)
13 9469 bp 70.98 8.82 93.21
PLM3_127_b2_sep16_scaffold_31553
Phylum: Rokubacteria (80%)
5 2950 bp 67.63 12.31 93.25
PLM3_127_b2_sep16_scaffold_56446
Phylum: Rokubacteria (80%)
5 4084 bp 69.03 8.04 93.29
PLM3_127_b2_sep16_scaffold_17115
Species: GWA2_Rokubacteria_70_23_curated (66.67%)
6 4726 bp 68.15 7.97 93.31
PLM3_127_b2_sep16_scaffold_32241
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 2912 bp 71.36 10.04 93.34
PLM3_127_b2_sep16_scaffold_121378
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 2772 bp 66.05 7.58 93.40
PLM3_127_b2_sep16_scaffold_40182
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 2560 bp 68.95 8.26 93.40
PLM3_127_b2_sep16_scaffold_56397
Phylum: Rokubacteria (50%)
6 3523 bp 70.05 8.64 93.41
PLM3_127_b2_sep16_scaffold_38075
Domain: Bacteria (88.89%)
9 6974 bp 68.50 6.71 93.43
PLM3_127_b2_sep16_scaffold_30675
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 2998 bp 68.61 6.45 93.46
PLM3_127_b2_sep16_scaffold_79213
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3020 bp 69.24 9.49 93.48
PLM3_127_b2_sep16_scaffold_20901
Domain: Bacteria (100%)
6 5503 bp 67.98 9.92 93.49
PLM3_127_b2_sep16_scaffold_49429
Phylum: Rokubacteria (100%)
5 4390 bp 69.02 9.09 93.55
PLM3_127_b2_sep16_scaffold_13387
Species: GWA2_Rokubacteria_70_23_curated (50%)
8 4826 bp 70.51 7.06 93.62
PLM3_127_b2_sep16_scaffold_39455
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 3326 bp 68.04 8.79 93.63
PLM3_127_b2_sep16_scaffold_31771
Domain: Bacteria (75%)
8 4758 bp 66.56 9.24 93.65
PLM3_127_b2_sep16_scaffold_23620
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 3482 bp 69.10 5.99 93.65
PLM3_127_b2_sep16_scaffold_27942
Species: RLO_Rokubacteria_71_22 (50%)
4 3168 bp 67.83 9.38 93.66
PLM3_127_b2_sep16_scaffold_11990
Species: GWA2_Rokubacteria_70_23_curated (71.43%)
7 5154 bp 70.26 9.90 93.66
PLM3_127_b2_sep16_scaffold_77751
Species: Candidatus Brocadia sinica (50%)
4 3049 bp 67.66 6.40 93.67
PLM3_127_b2_sep16_scaffold_20150
Species: RLO_Rokubacteria_71_22 (66.67%)
3 3818 bp 68.28 9.35 93.74
PLM3_127_b2_sep16_scaffold_22765
Species: GWA2_Rokubacteria_70_23_curated (80%)
10 7847 bp 69.44 9.39 93.74
PLM3_127_b2_sep16_scaffold_69086
Domain: Bacteria (100%)
4 4703 bp 69.23 7.59 93.77
PLM3_127_b2_sep16_scaffold_18865
Phylum: NC10 (50%)
4 3966 bp 69.42 7.53 93.80
PLM3_127_b2_sep16_scaffold_11709
Phylum: Rokubacteria (80%)
10 6823 bp 67.64 10.57 93.83
PLM3_127_b2_sep16_scaffold_34598
Domain: Bacteria (100%)
3 2791 bp 68.51 6.83 93.84
PLM3_127_b2_sep16_scaffold_104580
Domain: Bacteria (100%)
3 3200 bp 70.44 8.02 93.84
PLM3_127_b2_sep16_scaffold_29013
Phylum: Rokubacteria (90.91%)
11 7991 bp 68.49 9.01 93.86
PLM3_127_b2_sep16_scaffold_15482
Domain: Bacteria (71.43%)
7 6146 bp 69.00 7.03 93.87
PLM3_127_b2_sep16_scaffold_7055
Domain: Bacteria (100%)
9 6969 bp 69.54 7.88 93.89
PLM3_127_b2_sep16_scaffold_14080
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 6115 bp 67.85 11.16 93.90
PLM3_127_b2_sep16_scaffold_41379
Species: GWA2_Rokubacteria_70_23_curated (100%)
4 4292 bp 66.73 10.24 93.94
PLM3_127_b2_sep16_scaffold_17083
Phylum: Rokubacteria (50%)
6 4198 bp 69.15 8.36 93.97
PLM3_127_b2_sep16_scaffold_34692
Species: GWC2_Rokubacteria_70_16_curated (60%)
5 3390 bp 67.96 9.12 93.98
PLM3_127_b2_sep16_scaffold_32115
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 2917 bp 67.71 6.32 94.00
Displaying items 351-400 of 674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.