ggKbase home page

PLM1_100_b1_sep16_scaffold_5108

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_5108_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..339
DNA (339bp) protein (113aa)
Putative uncharacterized protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q605U3_METCA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_5108_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

347..1453
DNA (1107bp) protein (369aa)
RNA methyltransferase Tax=Sporolactobacillus inulinus RepID=UPI000255C254
RNA methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_5108_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1616..2860)
DNA (1245bp) protein (415aa)
Major facilitator superfamily MFS_1 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily MFS_1
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_5108_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3045..4130
DNA (1086bp) protein (362aa)
Amidohydrolase 2 Tax=uncultured bacterium RepID=K1XAN8_9BACT
putative TIM-barrel fold metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_5108_5
unknown

Not on your lists

4169..5305
DNA (1137bp) protein (379aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
UPI0003D6A195 related cluster Tax=unknown RepID=UPI0003D6A195
PLM1_100_b1_sep16_scaffold_5108_6
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

5359..5577
DNA (219bp) protein (73aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
PLM1_100_b1_sep16_scaffold_5108_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6229..7098
DNA (870bp) protein (290aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 7 items

View Taxonomy