ggKbase home page

PLM1_100_b1_sep16_scaffold_4165

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4165_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49..483)
DNA (435bp) protein (145aa)
Heat shock protein 15 Tax=Beggiatoa alba B18LD RepID=I3CGJ2_9GAMM
RNA-binding S4 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM1_100_b1_sep16_scaffold_4165_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(474..1223)
DNA (750bp) protein (250aa)
surE; 5'/3'-nucleotidase SurE (EC:3.1.3.5 3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
surE; stationary phase survival protein SurE (EC:3.1.3.5)
Tax=CSP1_2_Dadabacteria
PLM1_100_b1_sep16_scaffold_4165_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1335..2585
DNA (1251bp) protein (417aa)
Putative competence-damage inducible protein Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K8D2_HALHC
competence/damage-inducible protein CinA-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4165_4
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2676..4478)
DNA (1803bp) protein (601aa)
Oligoendopeptidase, pepF/M3 family bin=GWB2_Elusimicrobium_63_22 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
oligoendopeptidase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_100_b1_sep16_scaffold_4165_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4541..5518)
DNA (978bp) protein (326aa)
Ornithine cyclodeaminase bin=GWD2_Deltaproteobacteria_55_8 species=Thermococcus sibiricus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Ornithine cyclodeaminase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_4165_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5574..6113
DNA (540bp) protein (180aa)
Cupin Tax=Pseudomonas fluorescens R124 RepID=K0WHS9_PSEFL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4165_7
unknown

Not on your lists

comp(6143..6370)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4165_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6364..6711)
DNA (348bp) protein (116aa)
Sua5/yciO/yrdC/ywlC family protein bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 8 items

View Taxonomy