ggKbase home page

PLM1_100_b1_sep16_scaffold_4168

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4168_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150..536
DNA (387bp) protein (129aa)
Glycine cleavage system H protein bin=GWD2_Deltaproteobacteria_55_8 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gcvH; glycine cleavage system protein H
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_4168_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

499..1281
DNA (783bp) protein (261aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A824_THEID
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4168_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1595..2221
DNA (627bp) protein (209aa)
enolase (EC:4.2.1.11)
Enolase bin=GWD2_Deltaproteobacteria_55_8 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_4168_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2169..2870
DNA (702bp) protein (234aa)
eno; enolase (EC:4.2.1.11)
Enolase bin=GWD2_Deltaproteobacteria_55_8 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_4168_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2851..3576
DNA (726bp) protein (242aa)
Endonuclease III Tax=Microcoleus sp. PCC 7113 RepID=K9WGA2_9CYAN
endonuclease III
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_4168_6

Not on your lists

comp(3794..4651)
DNA (858bp) protein (286aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XT08_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD28216.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_4168_7
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4648..5040)
DNA (393bp) protein (131aa)
hypothetical protein Tax=Piscirickettsia salmonis RepID=UPI00036AD3ED
Probable transcriptional regulator
Tax=RBG_16_Gallionellales_57_15_curated
PLM1_100_b1_sep16_scaffold_4168_8
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(5127..6227)
DNA (1101bp) protein (367aa)
chemotaxis protein Tax=Desulfospira joergensenii RepID=UPI0003B578C0
chemotaxis protein CheY
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM1_100_b1_sep16_scaffold_4168_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6224..7147)
DNA (924bp) protein (308aa)
chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JC61_ANAD2
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM1_100_b1_sep16_scaffold_4168_10
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(7162..8730)
DNA (1569bp) protein (523aa)
Methyl-accepting chemotaxis sensory transducer Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CIW1_MYXFH
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM1_100_b1_sep16_scaffold_4168_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8753..9670)
DNA (918bp) protein (306aa)
Phosphate ABC transporter substrate-binding protein, PhoT family Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12D09_POLSJ
phosphate transport system substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 11 items

View Taxonomy