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PLM1_100_b1_sep16_scaffold_4442

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4442_1
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..261)
DNA (261bp) protein (87aa)
Haloacid dehalogenase domain protein hydrolase Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ATX6_PELPD
hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ABL00797.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM1_100_b1_sep16_scaffold_4442_2
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(356..1636)
DNA (1281bp) protein (427aa)
DNA protecting protein bin=GWF2_Methylomirabilis_70_14 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM1_100_b1_sep16_scaffold_4442_3
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(1742..3595)
DNA (1854bp) protein (618aa)
ATP-dependent DNA helicase RecQ Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IZU8_PSEUL
recQ; ATP-dependent DNA helicase RecQ
Tax=RBG_16_KB1_OP1_55_9_curated
PLM1_100_b1_sep16_scaffold_4442_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3641..4630)
DNA (990bp) protein (330aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4442_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4727..5758)
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Streptomyces sp. HGB0020 RepID=S2ZGF1_9ACTO
gentisate 1,2-dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4442_6
unknown

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comp(5957..6421)
DNA (465bp) protein (155aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4442_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6460..7545)
DNA (1086bp) protein (362aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_4442_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7677..8000)
DNA (324bp) protein (108aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_CPR2_39_7 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_4442_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7997..8569)
DNA (573bp) protein (191aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4442_10
unknown

Not on your lists

comp(8634..8915)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4442_11
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9105..9554)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T1W3_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE24637.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
PLM1_100_b1_sep16_scaffold_4442_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10276..10905)
DNA (630bp) protein (210aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_CPR2_39_7 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_4442_13
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10889..11041)
DNA (153bp) protein (51aa)
Putative uncharacterized protein Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W659_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE50666.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM1_100_b1_sep16_scaffold_4442_14
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11133..11963)
DNA (831bp) protein (277aa)
UbiE/COQ5 methyltransferase Tax=Clostridium sp. JC122 RepID=UPI0002897799
UbiE/COQ5 methyltransferase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM1_100_b1_sep16_scaffold_4442_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12008..12487)
DNA (480bp) protein (160aa)
type 11 methyltransferase bin=RBG_19FT_COMBO_GAL15_69_19 species=Gordonia rhizosphera genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative Methyltransferase type 11
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM1_100_b1_sep16_scaffold_4442_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12553..12741)
DNA (189bp) protein (63aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036952E1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 16 items

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