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PLM1_100_b1_sep16_scaffold_2554

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2554_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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141..842
DNA (702bp) protein (234aa)
Conserved hypothetical integral membrane protein bin=GWC2_Bacteroidetes_40_13 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_2554_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1058..2896)
DNA (1839bp) protein (613aa)
Amino acid permease-associated region bin=GWD2_Deltaproteobacteria_55_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amino acid/polyamine/organocation transporter, APC superfamily
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2554_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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3012..4160
DNA (1149bp) protein (383aa)
PAS domain S-box bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_2554_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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4169..4516
DNA (348bp) protein (116aa)
TPR repeat protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_2554_5
unknown

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4753..5304
DNA (552bp) protein (184aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2554_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5429..5956)
DNA (528bp) protein (176aa)
Integrase family protein 3 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNQ7_ACHXA
integrase
Integrase family protein 3 {ECO:0000313|EMBL:ADP17096.1}; Integrase family protein 4 {ECO:0000313|EMBL:ADP17579.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
PLM1_100_b1_sep16_scaffold_2554_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(5953..6246)
DNA (294bp) protein (98aa)
Transposase IS3/IS911 family protein Tax=Rhodanobacter fulvus Jip2 RepID=I4VJR5_9GAMM
transposase
Tax=RBG_16_Nitrospirae_64_22_curated
PLM1_100_b1_sep16_scaffold_2554_8
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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7006..8286
DNA (1281bp) protein (427aa)
peptidoglycan-binding lysin domain-containing protein; K02450 general secretion pathway protein A bin=bin3_NC10 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
exeA; peptidoglycan-binding ATPase
Tax=RBG_16_Acidobacteria_68_9_curated
PLM1_100_b1_sep16_scaffold_2554_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8310..8759
DNA (450bp) protein (150aa)
diguanylate cyclase Tax=Desulfovibrio longus RepID=UPI0003B2EF94
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 9 items

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