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PLM1_100_b1_sep16_scaffold_2557

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2557_1
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59..1639
DNA (1581bp) protein (527aa)
myeloperoxidase Tax=Frankia sp. Iso899 RepID=UPI0003B4A7C4
Myeloperoxidase, thyroid peroxidase, cyclooxygenase catalytic domain {ECO:0000313|EMBL:CEL12764.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_2557_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1713..2804
DNA (1092bp) protein (364aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW99568.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
PLM1_100_b1_sep16_scaffold_2557_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2993..3397)
DNA (405bp) protein (135aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000376F23B
glyoxalase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM1_100_b1_sep16_scaffold_2557_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4631..6781)
DNA (2151bp) protein (717aa)
ABC transporter, permease protein Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKC0_9PROT
aapM; general L-amino acid transport system permease AapM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM1_100_b1_sep16_scaffold_2557_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6803..7819)
DNA (1017bp) protein (339aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036932B6
bztA; general L-amino acid transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_2557_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8713..9024)
DNA (312bp) protein (104aa)
RNA-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rbpA; RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2557_7
unknown

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9092..9358
DNA (267bp) protein (89aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2557_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9370..9657
DNA (288bp) protein (96aa)
id=1901862 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_2557_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9889..10227)
DNA (339bp) protein (113aa)
Putative RNA-binding protein RbpA bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative RNA-binding protein RbpA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2557_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10316..11368)
DNA (1053bp) protein (351aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E82_MESSB
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein {ECO:0000313|EMBL:ABG64293.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
PLM1_100_b1_sep16_scaffold_2557_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11426..12151
DNA (726bp) protein (242aa)
Putative membrane protein Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B007_CLOA9
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_2557_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12232..13515
DNA (1284bp) protein (428aa)
Histidine--tRNA ligase Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=SYH_PELCD
hisS; histidyl-tRNA ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_2557_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13515..14468
DNA (954bp) protein (318aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_2557_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14462..15268
DNA (807bp) protein (269aa)
Suspect SCG annotation. See neighboring gene [PLM1_100_b1_sep16_scaffold_2557_13].
Aspartate--tRNA ligase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aspartyl-tRNA synthetase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 14 items

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